EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0033719 (Gene tree)
Gene ID: -
Gene Symbol: Ddx6
Alias: 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|Hlr2|Rck|mRCK/P54|p54|rck
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 41412 bases
Position: chr9:43080691-43122102
Accession: 104976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0092220	DEAD	PF00270.29	4.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0092220	-	6099	XM_011242391	MGP_CASTEiJ_P0092220	483 (aa)	XP_011240693	P54823

Gene Model

Click here to download MGP_CASTEiJ_G0033719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0033719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033719	Ddx6	69	31.755	MGP_CASTEiJ_G0034550	Ddx3x	54	31.755
MGP_CASTEiJ_G0033719	Ddx6	71	31.742	MGP_CASTEiJ_G0019865	Ddx41	57	32.022
MGP_CASTEiJ_G0033719	Ddx6	76	38.441	MGP_CASTEiJ_G0021938	Eif4a2	91	38.441
MGP_CASTEiJ_G0033719	Ddx6	74	30.025	MGP_CASTEiJ_G0017334	Ddx56	83	33.981
MGP_CASTEiJ_G0033719	Ddx6	74	31.234	MGP_CASTEiJ_G0029202	Ddx55	61	31.234
MGP_CASTEiJ_G0033719	Ddx6	77	31.771	MGP_CASTEiJ_G0034068	Ddx43	59	31.771
MGP_CASTEiJ_G0033719	Ddx6	80	33.503	MGP_CASTEiJ_G0026876	Ddx20	50	32.854
MGP_CASTEiJ_G0033719	Ddx6	82	34.750	MGP_CASTEiJ_G0032855	Ddx39	96	34.223
MGP_CASTEiJ_G0033719	Ddx6	76	34.872	MGP_CASTEiJ_G0033143	Ddx19a	79	34.872
MGP_CASTEiJ_G0033719	Ddx6	71	32.782	MGP_CASTEiJ_G0020197	Ddx4	51	32.782
MGP_CASTEiJ_G0033719	Ddx6	69	40.678	MGP_CASTEiJ_G0018908	Ddx1	53	40.678
MGP_CASTEiJ_G0033719	Ddx6	79	35.659	MGP_CASTEiJ_G0022856	Ddx39b	99	34.014
MGP_CASTEiJ_G0033719	Ddx6	66	30.699	MGP_CASTEiJ_G0015762	Ddx18	50	30.699
MGP_CASTEiJ_G0033719	Ddx6	69	32.402	MGP_CASTEiJ_G0016265	D1Pas1	54	32.402
MGP_CASTEiJ_G0033719	Ddx6	78	37.037	MGP_CASTEiJ_G0018781	Eif4a3	90	37.037
MGP_CASTEiJ_G0033719	Ddx6	78	32.987	MGP_CASTEiJ_G0030485	Ddx47	93	31.759
MGP_CASTEiJ_G0033719	Ddx6	74	33.784	MGP_CASTEiJ_G0033540	Ddx25	78	34.555
MGP_CASTEiJ_G0033719	Ddx6	77	31.159	MGP_CASTEiJ_G0021561	Ddx23	51	31.175
MGP_CASTEiJ_G0033719	Ddx6	75	33.333	MGP_CASTEiJ_G0032713	Ddx49	95	32.743
MGP_CASTEiJ_G0033719	Ddx6	80	30.256	MGP_CASTEiJ_G0015890	Ddx59	62	30.256
MGP_CASTEiJ_G0033719	Ddx6	76	31.915	MGP_CASTEiJ_G0018172	Ddx52	63	31.915
MGP_CASTEiJ_G0033719	Ddx6	74	30.894	MGP_CASTEiJ_G0021336	Ddx17	58	30.971