EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0033906 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 33901 bases
Position: chr9:58937625-58971525
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0092837	RRM_1	PF00076.22	2.2e-51	1	3
MGP_CASTEiJ_P0092837	RRM_1	PF00076.22	2.2e-51	2	3
MGP_CASTEiJ_P0092837	RRM_1	PF00076.22	2.2e-51	3	3
MGP_CASTEiJ_P0092835	RRM_1	PF00076.22	2.6e-51	1	3
MGP_CASTEiJ_P0092835	RRM_1	PF00076.22	2.6e-51	2	3
MGP_CASTEiJ_P0092835	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0092839	-	591	-	-	- (aa)	-	-
MGP_CASTEiJ_T0092838	-	449	-	-	- (aa)	-	-
MGP_CASTEiJ_T0092837	-	4575	-	MGP_CASTEiJ_P0092837	460 (aa)	-	-
MGP_CASTEiJ_T0092836	-	2901	-	MGP_CASTEiJ_P0092836	162 (aa)	-	-
MGP_CASTEiJ_T0092835	-	2950	-	MGP_CASTEiJ_P0092835	481 (aa)	-	-
MGP_CASTEiJ_T0092834	-	3075	XM_006511540	MGP_CASTEiJ_P0092834	182 (aa)	XP_006511603	Q7TN33

Gene Model

Click here to download MGP_CASTEiJ_G0033906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0033906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033906	Celf6	91	45.567	MGP_CASTEiJ_G0024528	Celf2	79	80.952
MGP_CASTEiJ_G0033906	Celf6	79	31.250	MGP_CASTEiJ_G0029831	Hnrnpa2b1	65	38.983
MGP_CASTEiJ_G0033906	Celf6	54	35.802	MGP_CASTEiJ_G0017172	Rbms2	50	35.802
MGP_CASTEiJ_G0033906	Celf6	100	67.200	MGP_CASTEiJ_G0023416	Celf4	99	67.066
MGP_CASTEiJ_G0033906	Celf6	91	45.549	MGP_CASTEiJ_G0025323	Celf1	98	45.135
MGP_CASTEiJ_G0033906	Celf6	66	32.500	MGP_CASTEiJ_G0017584	Hnrnpab	65	31.414
MGP_CASTEiJ_G0033906	Celf6	54	31.818	MGP_CASTEiJ_G0032110	Tial1	53	32.143
MGP_CASTEiJ_G0033906	Celf6	51	34.483	MGP_CASTEiJ_G0035010	Pabpc5	63	34.483
MGP_CASTEiJ_G0033906	Celf6	73	39.062	MGP_CASTEiJ_G0022384	Pabpc6	61	39.062
MGP_CASTEiJ_G0033906	Celf6	52	42.105	MGP_CASTEiJ_G0034390	Rbms3	82	42.105
MGP_CASTEiJ_G0033906	Celf6	57	42.308	MGP_CASTEiJ_G0033478	Elavl3	80	41.975
MGP_CASTEiJ_G0033906	Celf6	89	37.037	MGP_CASTEiJ_G0027579	Elavl2	78	40.741
MGP_CASTEiJ_G0033906	Celf6	95	35.802	MGP_CASTEiJ_G0027708	Elavl4	85	40.741
MGP_CASTEiJ_G0033906	Celf6	68	32.576	MGP_CASTEiJ_G0025058	Rbm45	89	30.000
MGP_CASTEiJ_G0033906	Celf6	75	84.783	MGP_CASTEiJ_G0016890	Celf5	93	80.645
MGP_CASTEiJ_G0033906	Celf6	53	41.558	MGP_CASTEiJ_G0024960	Rbms1	65	42.105
MGP_CASTEiJ_G0033906	Celf6	62	32.955	MGP_CASTEiJ_G0030063	Tia1	85	36.000
MGP_CASTEiJ_G0033906	Celf6	75	85.526	MGP_CASTEiJ_G0026707	Celf3	81	87.368