EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0033947 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 27844 bases
Position: chr9:64385476-64413319
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0093020	MMR_HSR1	PF01926.23	2.4e-07	1	1
MGP_CASTEiJ_P0093021	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_CASTEiJ_P0093015	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0093022	-	695	-	-	- (aa)	-	-
MGP_CASTEiJ_T0093021	-	595	-	MGP_CASTEiJ_P0093021	155 (aa)	-	-
MGP_CASTEiJ_T0093020	-	462	-	MGP_CASTEiJ_P0093020	153 (aa)	-	-
MGP_CASTEiJ_T0093016	-	726	-	MGP_CASTEiJ_P0093016	86 (aa)	-	-
MGP_CASTEiJ_T0093017	-	603	-	-	- (aa)	-	-
MGP_CASTEiJ_T0093015	-	5819	-	MGP_CASTEiJ_P0093015	216 (aa)	-	P62492
MGP_CASTEiJ_T0093018	-	500	-	MGP_CASTEiJ_P0093018	86 (aa)	-	-
MGP_CASTEiJ_T0093019	-	397	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0033947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0033947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033947	Rab11a	97	52.201	MGP_CASTEiJ_G0023899	Rab1b	84	55.357
MGP_CASTEiJ_G0033947	Rab11a	94	35.780	MGP_CASTEiJ_G0016681	Rab36	79	35.780
MGP_CASTEiJ_G0033947	Rab11a	95	70.748	MGP_CASTEiJ_G0026561	Rab25	99	62.150
MGP_CASTEiJ_G0033947	Rab11a	90	43.796	MGP_CASTEiJ_G0023193	Rab12	70	37.799
MGP_CASTEiJ_G0033947	Rab11a	100	50.000	MGP_CASTEiJ_G0017380	Rab1a	85	52.299
MGP_CASTEiJ_G0033947	Rab11a	90	43.066	MGP_CASTEiJ_G0026136	Rab22a	81	42.038
MGP_CASTEiJ_G0033947	Rab11a	81	34.127	MGP_CASTEiJ_G0030551	Kras	87	37.725
MGP_CASTEiJ_G0033947	Rab11a	74	30.303	MGP_CASTEiJ_G0018866	Dnajc27	60	30.303
MGP_CASTEiJ_G0033947	Rab11a	91	46.763	MGP_CASTEiJ_G0019160	Rab15	93	40.887
MGP_CASTEiJ_G0033947	Rab11a	95	54.110	MGP_CASTEiJ_G0024846	Rab14	99	54.362
MGP_CASTEiJ_G0033947	Rab11a	89	42.143	MGP_CASTEiJ_G0035073	Rab9b	86	41.040
MGP_CASTEiJ_G0033947	Rab11a	87	38.686	MGP_CASTEiJ_G0030093	Rab7	91	45.833
MGP_CASTEiJ_G0033947	Rab11a	91	56.115	MGP_CASTEiJ_G0020554	Rab2b	99	46.729
MGP_CASTEiJ_G0033947	Rab11a	81	34.921	MGP_CASTEiJ_G0032241	Hras	85	37.654
MGP_CASTEiJ_G0033947	Rab11a	68	30.065	MGP_CASTEiJ_G0015866	Arl8a	77	30.065
MGP_CASTEiJ_G0033947	Rab11a	75	40.000	MGP_CASTEiJ_G0021498	Rabl2	67	37.908
MGP_CASTEiJ_G0033947	Rab11a	100	96.078	MGP_CASTEiJ_G0022763	Rab11b	100	90.367
MGP_CASTEiJ_G0033947	Rab11a	94	39.423	MGP_CASTEiJ_G0035224	Rab9	97	39.423
MGP_CASTEiJ_G0033947	Rab11a	91	44.604	MGP_CASTEiJ_G0031541	Rab30	97	37.981
MGP_CASTEiJ_G0033947	Rab11a	88	49.265	MGP_CASTEiJ_G0034827	Rab39b	82	46.857
MGP_CASTEiJ_G0033947	Rab11a	89	43.885	MGP_CASTEiJ_G0018675	Rab37	77	45.181
MGP_CASTEiJ_G0033947	Rab11a	90	40.426	MGP_CASTEiJ_G0034658	Rab33a	74	39.665
MGP_CASTEiJ_G0033947	Rab11a	86	34.586	MGP_CASTEiJ_G0028465	Rheb	89	32.927
MGP_CASTEiJ_G0033947	Rab11a	88	48.148	MGP_CASTEiJ_G0023094	Rab5a	91	41.951
MGP_CASTEiJ_G0033947	Rab11a	92	34.752	MGP_CASTEiJ_G0015254	Rab23	80	32.984
MGP_CASTEiJ_G0033947	Rab11a	90	49.635	MGP_CASTEiJ_G0029079	Rab35	99	42.512
MGP_CASTEiJ_G0033947	Rab11a	93	41.379	MGP_CASTEiJ_G0026366	Rab33b	85	37.799
MGP_CASTEiJ_G0033947	Rab11a	93	48.252	MGP_CASTEiJ_G0023338	Rab18	78	47.531
MGP_CASTEiJ_G0033947	Rab11a	88	49.630	MGP_CASTEiJ_G0018472	Rab5c	90	41.262
MGP_CASTEiJ_G0033947	Rab11a	81	34.921	MGP_CASTEiJ_G0026847	Nras	95	37.931
MGP_CASTEiJ_G0033947	Rab11a	81	31.746	MGP_CASTEiJ_G0034164	Mras	85	32.768
MGP_CASTEiJ_G0033947	Rab11a	78	31.746	MGP_CASTEiJ_G0019000	Arl4a	60	31.746
MGP_CASTEiJ_G0033947	Rab11a	88	48.889	MGP_CASTEiJ_G0017200	Rab5b	75	47.205
MGP_CASTEiJ_G0033947	Rab11a	93	42.254	MGP_CASTEiJ_G0023184	Rab31	86	41.071
MGP_CASTEiJ_G0033947	Rab11a	88	35.821	MGP_CASTEiJ_G0034188	Rab6b	77	35.404
MGP_CASTEiJ_G0033947	Rab11a	91	56.835	MGP_CASTEiJ_G0027193	Rab2a	81	54.971
MGP_CASTEiJ_G0033947	Rab11a	88	31.293	MGP_CASTEiJ_G0029478	Rasl11a	60	31.293