EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034068 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 32475 bases
Position: chr9:78773601-78806075
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0093518	KH_1	PF00013.29	4.6e-12	1	1
MGP_CASTEiJ_P0093518	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0093518	-	2207	-	MGP_CASTEiJ_P0093518	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_CASTEiJ_G0034068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034068	Ddx43	60	40.000	MGP_CASTEiJ_G0020197	Ddx4	56	40.000
MGP_CASTEiJ_G0034068	Ddx43	54	33.799	MGP_CASTEiJ_G0016635	Ddx50	53	33.799
MGP_CASTEiJ_G0034068	Ddx43	53	32.044	MGP_CASTEiJ_G0029202	Ddx55	59	32.044
MGP_CASTEiJ_G0034068	Ddx43	64	36.941	MGP_CASTEiJ_G0019865	Ddx41	65	37.232
MGP_CASTEiJ_G0034068	Ddx43	57	36.412	MGP_CASTEiJ_G0030485	Ddx47	91	34.218
MGP_CASTEiJ_G0034068	Ddx43	63	34.375	MGP_CASTEiJ_G0018172	Ddx52	69	34.375
MGP_CASTEiJ_G0034068	Ddx43	59	31.771	MGP_CASTEiJ_G0033719	Ddx6	77	31.771
MGP_CASTEiJ_G0034068	Ddx43	55	34.974	MGP_CASTEiJ_G0015762	Ddx18	56	34.974
MGP_CASTEiJ_G0034068	Ddx43	57	44.947	MGP_CASTEiJ_G0018617	-	89	45.040
MGP_CASTEiJ_G0034068	Ddx43	56	32.240	MGP_CASTEiJ_G0021938	Eif4a2	91	31.398
MGP_CASTEiJ_G0034068	Ddx43	60	39.012	MGP_CASTEiJ_G0016265	D1Pas1	61	39.012
MGP_CASTEiJ_G0034068	Ddx43	60	34.913	MGP_CASTEiJ_G0032713	Ddx49	93	34.897
MGP_CASTEiJ_G0034068	Ddx43	54	31.268	MGP_CASTEiJ_G0018781	Eif4a3	83	31.268
MGP_CASTEiJ_G0034068	Ddx43	68	43.527	MGP_CASTEiJ_G0021336	Ddx17	67	43.527
MGP_CASTEiJ_G0034068	Ddx43	63	40.757	MGP_CASTEiJ_G0021561	Ddx23	54	40.757
MGP_CASTEiJ_G0034068	Ddx43	54	30.159	MGP_CASTEiJ_G0033086	Ddx28	70	30.423
MGP_CASTEiJ_G0034068	Ddx43	62	33.580	MGP_CASTEiJ_G0015890	Ddx59	64	33.333
MGP_CASTEiJ_G0034068	Ddx43	57	40.310	MGP_CASTEiJ_G0034550	Ddx3x	61	39.259