EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034126 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 67638 bases
Position: chr9:92676356-92743993
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0093818	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_CASTEiJ_P0093819	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0093822	-	1275	-	-	- (aa)	-	-
MGP_CASTEiJ_T0093821	-	596	-	-	- (aa)	-	-
MGP_CASTEiJ_T0093820	-	844	-	-	- (aa)	-	-
MGP_CASTEiJ_T0093818	-	3648	-	MGP_CASTEiJ_P0093818	737 (aa)	-	Q9R0B9
MGP_CASTEiJ_T0093819	-	3662	-	MGP_CASTEiJ_P0093819	758 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0034126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034126	Plod2	95	60.313	MGP_CASTEiJ_G0028225	Plod1	99	59.041
MGP_CASTEiJ_G0034126	Plod2	95	59.972	MGP_CASTEiJ_G0029317	Plod3	100	57.895