EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034188 (Gene tree)
Gene ID: -
Gene Symbol: Rab6b
Alias: 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e|Rab6B
Full Name: RAB6B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 78798 bases
Position: chr9:103679934-103758731
Accession: 107283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0094109	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0094109	-	5020	-	MGP_CASTEiJ_P0094109	208 (aa)	-	-
MGP_CASTEiJ_T0094108	-	713	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0034188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034188	Rab6b	93	32.000	MGP_CASTEiJ_G0035073	Rab9b	97	32.000
MGP_CASTEiJ_G0034188	Rab6b	94	36.410	MGP_CASTEiJ_G0017380	Rab1a	94	36.410
MGP_CASTEiJ_G0034188	Rab6b	75	32.911	MGP_CASTEiJ_G0026847	Nras	99	33.333
MGP_CASTEiJ_G0034188	Rab6b	87	36.464	MGP_CASTEiJ_G0023184	Rab31	92	36.464
MGP_CASTEiJ_G0034188	Rab6b	93	37.879	MGP_CASTEiJ_G0023899	Rab1b	96	37.879
MGP_CASTEiJ_G0034188	Rab6b	95	34.615	MGP_CASTEiJ_G0034827	Rab39b	98	34.615
MGP_CASTEiJ_G0034188	Rab6b	76	31.875	MGP_CASTEiJ_G0034164	Mras	84	30.337
MGP_CASTEiJ_G0034188	Rab6b	94	36.408	MGP_CASTEiJ_G0024846	Rab14	95	36.408
MGP_CASTEiJ_G0034188	Rab6b	95	34.466	MGP_CASTEiJ_G0034658	Rab33a	86	34.466
MGP_CASTEiJ_G0034188	Rab6b	82	35.028	MGP_CASTEiJ_G0035224	Rab9	87	35.028
MGP_CASTEiJ_G0034188	Rab6b	75	40.385	MGP_CASTEiJ_G0023193	Rab12	54	40.385
MGP_CASTEiJ_G0034188	Rab6b	77	35.404	MGP_CASTEiJ_G0033947	Rab11a	88	35.821
MGP_CASTEiJ_G0034188	Rab6b	77	35.404	MGP_CASTEiJ_G0022763	Rab11b	74	35.404
MGP_CASTEiJ_G0034188	Rab6b	94	36.620	MGP_CASTEiJ_G0016681	Rab36	80	36.620
MGP_CASTEiJ_G0034188	Rab6b	77	44.099	MGP_CASTEiJ_G0018675	Rab37	75	44.099
MGP_CASTEiJ_G0034188	Rab6b	94	32.323	MGP_CASTEiJ_G0026561	Rab25	93	32.323
MGP_CASTEiJ_G0034188	Rab6b	75	35.000	MGP_CASTEiJ_G0028465	Rheb	85	35.000
MGP_CASTEiJ_G0034188	Rab6b	94	34.328	MGP_CASTEiJ_G0026366	Rab33b	86	34.466
MGP_CASTEiJ_G0034188	Rab6b	95	30.151	MGP_CASTEiJ_G0032241	Hras	98	30.151
MGP_CASTEiJ_G0034188	Rab6b	94	36.585	MGP_CASTEiJ_G0019160	Rab15	96	36.585
MGP_CASTEiJ_G0034188	Rab6b	92	36.269	MGP_CASTEiJ_G0026136	Rab22a	98	36.269
MGP_CASTEiJ_G0034188	Rab6b	77	41.615	MGP_CASTEiJ_G0031541	Rab30	79	41.615
MGP_CASTEiJ_G0034188	Rab6b	76	41.139	MGP_CASTEiJ_G0015254	Rab23	66	41.139
MGP_CASTEiJ_G0034188	Rab6b	95	38.119	MGP_CASTEiJ_G0023338	Rab18	94	38.119
MGP_CASTEiJ_G0034188	Rab6b	94	36.683	MGP_CASTEiJ_G0030093	Rab7	90	50.704
MGP_CASTEiJ_G0034188	Rab6b	86	39.888	MGP_CASTEiJ_G0027193	Rab2a	81	39.888
MGP_CASTEiJ_G0034188	Rab6b	93	36.318	MGP_CASTEiJ_G0020554	Rab2b	90	36.318
MGP_CASTEiJ_G0034188	Rab6b	98	42.718	MGP_CASTEiJ_G0023094	Rab5a	95	42.718
MGP_CASTEiJ_G0034188	Rab6b	77	30.769	MGP_CASTEiJ_G0029478	Rasl11a	69	30.769
MGP_CASTEiJ_G0034188	Rab6b	85	36.667	MGP_CASTEiJ_G0018075	Rab34	68	36.667
MGP_CASTEiJ_G0034188	Rab6b	74	38.961	MGP_CASTEiJ_G0029079	Rab35	76	38.961
MGP_CASTEiJ_G0034188	Rab6b	74	32.680	MGP_CASTEiJ_G0021498	Rabl2	67	32.680
MGP_CASTEiJ_G0034188	Rab6b	80	45.783	MGP_CASTEiJ_G0017200	Rab5b	77	45.783
MGP_CASTEiJ_G0034188	Rab6b	98	41.379	MGP_CASTEiJ_G0018472	Rab5c	94	41.379
MGP_CASTEiJ_G0034188	Rab6b	75	32.278	MGP_CASTEiJ_G0030551	Kras	83	32.278