EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034221 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 73169 bases
Position: chr9:107077482-107150650
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0094291	eIF2A	PF08662.11	2.7e-10	1	1
MGP_CASTEiJ_P0094290	eIF2A	PF08662.11	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0094291	-	1242	-	MGP_CASTEiJ_P0094291	356 (aa)	-	-
MGP_CASTEiJ_T0094290	-	1695	XM_006511831	MGP_CASTEiJ_P0094290	405 (aa)	XP_006511894	Q8JZX3
MGP_CASTEiJ_T0094293	-	727	-	-	- (aa)	-	-
MGP_CASTEiJ_T0094292	-	1463	-	-	- (aa)	-	-
MGP_CASTEiJ_T0094294	-	526	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0034221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034221	Poc1a	83	34.109	MGP_CASTEiJ_G0022036	Wdr5b	92	34.135
MGP_CASTEiJ_G0034221	Poc1a	81	32.353	MGP_CASTEiJ_G0033834	Wdr61	97	31.658
MGP_CASTEiJ_G0034221	Poc1a	83	35.659	MGP_CASTEiJ_G0024712	Wdr5	98	30.973
MGP_CASTEiJ_G0034221	Poc1a	80	36.364	MGP_CASTEiJ_G0025633	Ciao1	85	36.364
MGP_CASTEiJ_G0034221	Poc1a	82	30.000	MGP_CASTEiJ_G0027486	Prpf4	56	30.000
MGP_CASTEiJ_G0034221	Poc1a	82	32.218	MGP_CASTEiJ_G0020124	Utp15	59	32.218
MGP_CASTEiJ_G0034221	Poc1a	93	32.716	MGP_CASTEiJ_G0026822	Wdr3	58	31.447
MGP_CASTEiJ_G0034221	Poc1a	80	30.037	MGP_CASTEiJ_G0024068	Prpf19	55	30.037