EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0034263 (Gene tree)
Gene ID
-
Gene Symbol
Rbm5
Alias
D030069N10Rik|Luca15
Full Name
RNA binding motif protein 5
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
37666 bases
Position
chr9:108621486-108659151
Accession
1933204
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0094564zf-RanBPPF00641.184.7e-1011
MGP_CASTEiJ_P0094550zf-RanBPPF00641.181.7e-0911
MGP_CASTEiJ_P0094547zf-RanBPPF00641.181.7e-0911
MGP_CASTEiJ_P0094550RRM_1PF00076.222.7e-1411
MGP_CASTEiJ_P0094547RRM_1PF00076.222.7e-1411
MGP_CASTEiJ_P0094564RRM_1PF00076.222.9e-0811
MGP_CASTEiJ_P0094550G-patchPF01585.239.2e-1911
MGP_CASTEiJ_P0094547G-patchPF01585.239.2e-1911
MGP_CASTEiJ_P0094552G-patchPF01585.237.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0094552-830-MGP_CASTEiJ_P0094552153 (aa)--
MGP_CASTEiJ_T0094553-631--- (aa)--
MGP_CASTEiJ_T0094550-3064-MGP_CASTEiJ_P0094550814 (aa)--
MGP_CASTEiJ_T0094551-2986-MGP_CASTEiJ_P0094551150 (aa)--
MGP_CASTEiJ_T0094556-1704-MGP_CASTEiJ_P0094556115 (aa)--
MGP_CASTEiJ_T0094557-322-MGP_CASTEiJ_P0094557100 (aa)--
MGP_CASTEiJ_T0094554-793--- (aa)--
MGP_CASTEiJ_T0094555-4715--- (aa)--
MGP_CASTEiJ_T0094549-2691--- (aa)--
MGP_CASTEiJ_T0094558-500--- (aa)--
MGP_CASTEiJ_T0094559-539--- (aa)--
MGP_CASTEiJ_T0094548-6331--- (aa)--
MGP_CASTEiJ_T0094570-1776--- (aa)--
MGP_CASTEiJ_T0094567-781-MGP_CASTEiJ_P0094567115 (aa)--
MGP_CASTEiJ_T0094566-869-MGP_CASTEiJ_P0094566137 (aa)--
MGP_CASTEiJ_T0094565-1938--- (aa)--
MGP_CASTEiJ_T0094564-850-MGP_CASTEiJ_P0094564251 (aa)--
MGP_CASTEiJ_T0094563-502--- (aa)--
MGP_CASTEiJ_T0094562-784-MGP_CASTEiJ_P0094562150 (aa)--
MGP_CASTEiJ_T0094561-896-MGP_CASTEiJ_P0094561174 (aa)--
MGP_CASTEiJ_T0094560-608--- (aa)--
MGP_CASTEiJ_T0094547-3201XM_006511870MGP_CASTEiJ_P0094547815 (aa)XP_006511933Q91YE7
MGP_CASTEiJ_T0094569-1284--- (aa)--
MGP_CASTEiJ_T0094568-897--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0034263's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034263's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0034263Rbm57534.783MGP_CASTEiJ_G0016267Gpatch25437.600
MGP_CASTEiJ_G0034263Rbm58747.303MGP_CASTEiJ_G0034572Rbm106971.480

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us