EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034524 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 7121 bases
Position: chrX:2729570-2736690
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0095771	RRM_1	PF00076.22	1.7e-24	1	1
MGP_CASTEiJ_P0095770	RRM_1	PF00076.22	1.7e-24	1	1
MGP_CASTEiJ_P0095772	RRM_1	PF00076.22	2e-24	1	1
MGP_CASTEiJ_P0095773	RRM_1	PF00076.22	2e-24	1	1
MGP_CASTEiJ_P0095774	RRM_1	PF00076.22	2e-24	1	1
MGP_CASTEiJ_P0095775	RRM_1	PF00076.22	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0095776	-	1253	-	MGP_CASTEiJ_P0095776	90 (aa)	-	-
MGP_CASTEiJ_T0095779	-	719	-	-	- (aa)	-	-
MGP_CASTEiJ_T0095778	-	1219	-	-	- (aa)	-	-
MGP_CASTEiJ_T0095775	-	1540	-	MGP_CASTEiJ_P0095775	159 (aa)	-	-
MGP_CASTEiJ_T0095774	-	1463	-	MGP_CASTEiJ_P0095774	159 (aa)	-	-
MGP_CASTEiJ_T0095777	-	1072	-	MGP_CASTEiJ_P0095777	90 (aa)	-	-
MGP_CASTEiJ_T0095769	-	2281	-	-	- (aa)	-	-
MGP_CASTEiJ_T0095771	-	976	-	MGP_CASTEiJ_P0095771	156 (aa)	-	-
MGP_CASTEiJ_T0095770	-	2791	-	MGP_CASTEiJ_P0095770	157 (aa)	-	-
MGP_CASTEiJ_T0095773	-	1497	-	MGP_CASTEiJ_P0095773	159 (aa)	-	-
MGP_CASTEiJ_T0095772	-	1651	-	MGP_CASTEiJ_P0095772	159 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0034524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034524	Rbm3	82	38.710	MGP_CASTEiJ_G0027579	Elavl2	63	32.911
MGP_CASTEiJ_G0034524	Rbm3	87	40.000	MGP_CASTEiJ_G0027867	Pabpc4	89	37.500
MGP_CASTEiJ_G0034524	Rbm3	67	44.000	MGP_CASTEiJ_G0029831	Hnrnpa2b1	55	45.833
MGP_CASTEiJ_G0034524	Rbm3	78	55.714	MGP_CASTEiJ_G0034713	Rbmx	79	56.790
MGP_CASTEiJ_G0034524	Rbm3	79	32.394	MGP_CASTEiJ_G0022681	Srsf3	57	34.211
MGP_CASTEiJ_G0034524	Rbm3	81	43.243	MGP_CASTEiJ_G0018234	Msi2	61	42.857
MGP_CASTEiJ_G0034524	Rbm3	73	33.333	MGP_CASTEiJ_G0029200	Snrnp35	55	34.848
MGP_CASTEiJ_G0034524	Rbm3	81	41.176	MGP_CASTEiJ_G0016822	-	78	46.032
MGP_CASTEiJ_G0034524	Rbm3	90	35.385	MGP_CASTEiJ_G0026358	Pabpc4l	84	35.821
MGP_CASTEiJ_G0034524	Rbm3	78	37.931	MGP_CASTEiJ_G0028890	Hnrnpd	64	37.931
MGP_CASTEiJ_G0034524	Rbm3	82	38.710	MGP_CASTEiJ_G0027708	Elavl4	58	31.646
MGP_CASTEiJ_G0034524	Rbm3	100	62.209	MGP_CASTEiJ_G0016816	Cirbp	99	59.302
MGP_CASTEiJ_G0034524	Rbm3	66	42.373	MGP_CASTEiJ_G0015387	Boll	57	34.211
MGP_CASTEiJ_G0034524	Rbm3	99	35.955	MGP_CASTEiJ_G0030063	Tia1	70	41.333
MGP_CASTEiJ_G0034524	Rbm3	79	33.803	MGP_CASTEiJ_G0028079	-	68	34.667
MGP_CASTEiJ_G0034524	Rbm3	79	30.986	MGP_CASTEiJ_G0021144	Gm12355	54	32.895