EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034606 (Gene tree)
Gene ID: -
Gene Symbol: Sept6
Alias: 2810035H17Rik|C920001C06Rik|Kiaa0128|Sep6|mKIAA0128
Full Name: septin 6
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 84474 bases
Position: chrX:20318937-20403410
Accession: 1888939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0096043	MMR_HSR1	PF01926.23	6.9e-05	1	1
MGP_CASTEiJ_P0096042	MMR_HSR1	PF01926.23	6.9e-05	1	1
MGP_CASTEiJ_P0096044	MMR_HSR1	PF01926.23	6.9e-05	1	1
MGP_CASTEiJ_P0096045	MMR_HSR1	PF01926.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0096046	-	3390	-	-	- (aa)	-	-
MGP_CASTEiJ_T0096044	-	1845	-	MGP_CASTEiJ_P0096044	434 (aa)	-	-
MGP_CASTEiJ_T0096045	-	530	-	MGP_CASTEiJ_P0096045	141 (aa)	-	-
MGP_CASTEiJ_T0096042	-	3457	XM_006541388	MGP_CASTEiJ_P0096042	429 (aa)	XP_006541451	Q9R1T4
MGP_CASTEiJ_T0096043	-	4673	-	MGP_CASTEiJ_P0096043	427 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0034606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034606	Sept6	100	82.028	MGP_CASTEiJ_G0028867	Sept11	100	82.201
MGP_CASTEiJ_G0034606	Sept6	67	41.176	MGP_CASTEiJ_G0021739	Sept12	80	38.077
MGP_CASTEiJ_G0034606	Sept6	69	43.234	MGP_CASTEiJ_G0015692	Sept2	100	41.284
MGP_CASTEiJ_G0034606	Sept6	68	42.088	MGP_CASTEiJ_G0021397	Sept3	88	42.088
MGP_CASTEiJ_G0034606	Sept6	76	41.349	MGP_CASTEiJ_G0032053	Sept1	100	40.136
MGP_CASTEiJ_G0034606	Sept6	100	70.023	MGP_CASTEiJ_G0016585	Sept10	100	69.374
MGP_CASTEiJ_G0034606	Sept6	99	36.552	MGP_CASTEiJ_G0018749	Sept9	81	46.970
MGP_CASTEiJ_G0034606	Sept6	67	43.390	MGP_CASTEiJ_G0018215	Sept4	93	43.390
MGP_CASTEiJ_G0034606	Sept6	100	76.690	MGP_CASTEiJ_G0017614	Sept8	100	76.690
MGP_CASTEiJ_G0034606	Sept6	97	40.610	MGP_CASTEiJ_G0033500	Sept7	95	39.906
MGP_CASTEiJ_G0034606	Sept6	76	41.791	MGP_CASTEiJ_G0021876	Sept5	90	41.716