EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034649 (Gene tree)
Gene ID: -
Gene Symbol: Ocrl
Alias: 9530014D17Rik|BB143339|OCRL1
Full Name: oculocerebrorenal syndrome of Lowe
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 55093 bases
Position: chrX:30923453-30978545
Accession: 109589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0096171	Exo_endo_phos	PF03372.23	3.4e-15	1	1
MGP_CASTEiJ_P0096174	Exo_endo_phos	PF03372.23	4.1e-15	1	1
MGP_CASTEiJ_P0096170	Exo_endo_phos	PF03372.23	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0096172	-	2930	-	-	- (aa)	-	-
MGP_CASTEiJ_T0096173	-	2839	-	-	- (aa)	-	-
MGP_CASTEiJ_T0096170	-	5242	XM_011251008	MGP_CASTEiJ_P0096170	900 (aa)	XP_011249310	Q6NVF0
MGP_CASTEiJ_T0096171	-	3209	-	MGP_CASTEiJ_P0096171	727 (aa)	-	-
MGP_CASTEiJ_T0096176	-	799	-	MGP_CASTEiJ_P0096176	265 (aa)	-	-
MGP_CASTEiJ_T0096174	-	5499	-	MGP_CASTEiJ_P0096174	887 (aa)	-	-
MGP_CASTEiJ_T0096175	-	723	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034649	Ocrl	82	52.060	MGP_CASTEiJ_G0027882	Inpp5b	71	52.228
MGP_CASTEiJ_G0034649	Ocrl	50	32.039	MGP_CASTEiJ_G0022359	Synj2	58	32.653