EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0034736 (Gene tree)
Gene ID
-
Gene Symbol
Fmr1
Alias
FMRP|Fmr-1
Full Name
fragile X mental retardation syndrome 1
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
42316 bases
Position
chrX:50246668-50288983
Accession
95564
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0096411KH_1PF00013.291e-1512
MGP_CASTEiJ_P0096411KH_1PF00013.291e-1522
MGP_CASTEiJ_P0096408KH_1PF00013.291.2e-1512
MGP_CASTEiJ_P0096408KH_1PF00013.291.2e-1522
MGP_CASTEiJ_P0096403KH_1PF00013.291.2e-1512
MGP_CASTEiJ_P0096403KH_1PF00013.291.2e-1522
MGP_CASTEiJ_P0096409KH_1PF00013.291.6e-1512
MGP_CASTEiJ_P0096409KH_1PF00013.291.6e-1522
MGP_CASTEiJ_P0096410KH_1PF00013.291.7e-1512
MGP_CASTEiJ_P0096410KH_1PF00013.291.7e-1522
MGP_CASTEiJ_P0096407KH_1PF00013.294.7e-1111
MGP_CASTEiJ_P0096409AgenetPF05641.122.6e-1111
MGP_CASTEiJ_P0096411AgenetPF05641.122.8e-1111
MGP_CASTEiJ_P0096410AgenetPF05641.122.8e-1111
MGP_CASTEiJ_P0096403AgenetPF05641.123.1e-1111
MGP_CASTEiJ_P0096407AgenetPF05641.123.8e-1111
MGP_CASTEiJ_P0096408AgenetPF05641.124e-1111
MGP_CASTEiJ_P0096407FXMRP1_C_corePF12235.83.2e-4611
MGP_CASTEiJ_P0096410FXMRP1_C_corePF12235.83.2e-4611
MGP_CASTEiJ_P0096403FXMRP1_C_corePF12235.83.4e-4611
MGP_CASTEiJ_P0096408FXMRP1_C_corePF12235.83.7e-4611
MGP_CASTEiJ_P0096409FXMRP1_C_corePF12235.82.6e-3111
MGP_CASTEiJ_P0096411FXMRP1_C_corePF12235.83.1e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0096412-1951--- (aa)--
MGP_CASTEiJ_T0096408-4192-MGP_CASTEiJ_P0096408631 (aa)--
MGP_CASTEiJ_T0096409-4054-MGP_CASTEiJ_P0096409585 (aa)--
MGP_CASTEiJ_T0096406-719--- (aa)--
MGP_CASTEiJ_T0096407-4250-MGP_CASTEiJ_P0096407591 (aa)--
MGP_CASTEiJ_T0096404-1885--- (aa)--
MGP_CASTEiJ_T0096405-2890--- (aa)--
MGP_CASTEiJ_T0096403-4402XM_006527810MGP_CASTEiJ_P0096403614 (aa)XP_006527873D3Z6U8
MGP_CASTEiJ_T0096414-646--- (aa)--
MGP_CASTEiJ_T0096411-4051-MGP_CASTEiJ_P0096411589 (aa)--
MGP_CASTEiJ_T0096410-4069-MGP_CASTEiJ_P0096410593 (aa)--
MGP_CASTEiJ_T0096413-588--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0034736's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034736's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0034736Fmr18465.139MGP_CASTEiJ_G0026316Fxr18073.620
MGP_CASTEiJ_G0034736Fmr18259.759MGP_CASTEiJ_G0017850Fxr26771.601

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