EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0034827 (Gene tree)
Gene ID: -
Gene Symbol: Rab39b
Alias: 6330580M05Rik|Rab39B
Full Name: RAB39B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 6188 bases
Position: chrX:57240633-57246820
Accession: 1915040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0096865	MMR_HSR1	PF01926.23	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0096865	-	3403	-	MGP_CASTEiJ_P0096865	213 (aa)	-	Q8BHC1

Gene Model

Click here to download MGP_CASTEiJ_G0034827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0034827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0034827	Rab39b	84	43.017	MGP_CASTEiJ_G0029079	Rab35	82	44.444
MGP_CASTEiJ_G0034827	Rab39b	75	43.125	MGP_CASTEiJ_G0019160	Rab15	75	43.125
MGP_CASTEiJ_G0034827	Rab39b	82	39.106	MGP_CASTEiJ_G0035224	Rab9	88	39.106
MGP_CASTEiJ_G0034827	Rab39b	77	38.922	MGP_CASTEiJ_G0035073	Rab9b	82	38.922
MGP_CASTEiJ_G0034827	Rab39b	88	46.809	MGP_CASTEiJ_G0020554	Rab2b	86	46.809
MGP_CASTEiJ_G0034827	Rab39b	80	31.844	MGP_CASTEiJ_G0029478	Rasl11a	73	31.844
MGP_CASTEiJ_G0034827	Rab39b	80	30.286	MGP_CASTEiJ_G0018866	Dnajc27	64	30.286
MGP_CASTEiJ_G0034827	Rab39b	80	36.782	MGP_CASTEiJ_G0034164	Mras	81	36.782
MGP_CASTEiJ_G0034827	Rab39b	78	38.690	MGP_CASTEiJ_G0023184	Rab31	85	38.690
MGP_CASTEiJ_G0034827	Rab39b	78	38.554	MGP_CASTEiJ_G0032241	Hras	86	38.554
MGP_CASTEiJ_G0034827	Rab39b	78	36.747	MGP_CASTEiJ_G0026136	Rab22a	85	36.747
MGP_CASTEiJ_G0034827	Rab39b	80	43.275	MGP_CASTEiJ_G0026561	Rab25	79	43.275
MGP_CASTEiJ_G0034827	Rab39b	82	47.126	MGP_CASTEiJ_G0022763	Rab11b	79	47.126
MGP_CASTEiJ_G0034827	Rab39b	75	31.875	MGP_CASTEiJ_G0021498	Rabl2	69	31.875
MGP_CASTEiJ_G0034827	Rab39b	98	34.615	MGP_CASTEiJ_G0034188	Rab6b	95	34.615
MGP_CASTEiJ_G0034827	Rab39b	82	46.857	MGP_CASTEiJ_G0033947	Rab11a	88	49.265
MGP_CASTEiJ_G0034827	Rab39b	78	42.262	MGP_CASTEiJ_G0023193	Rab12	57	42.262
MGP_CASTEiJ_G0034827	Rab39b	78	37.952	MGP_CASTEiJ_G0030551	Kras	87	37.349
MGP_CASTEiJ_G0034827	Rab39b	73	36.306	MGP_CASTEiJ_G0018075	Rab34	60	36.306
MGP_CASTEiJ_G0034827	Rab39b	99	39.810	MGP_CASTEiJ_G0023899	Rab1b	99	39.810
MGP_CASTEiJ_G0034827	Rab39b	76	44.785	MGP_CASTEiJ_G0018675	Rab37	75	44.785
MGP_CASTEiJ_G0034827	Rab39b	69	30.612	MGP_CASTEiJ_G0028465	Rheb	79	30.612
MGP_CASTEiJ_G0034827	Rab39b	77	46.707	MGP_CASTEiJ_G0026366	Rab33b	72	46.707
MGP_CASTEiJ_G0034827	Rab39b	76	34.545	MGP_CASTEiJ_G0030093	Rab7	90	40.278
MGP_CASTEiJ_G0034827	Rab39b	98	43.868	MGP_CASTEiJ_G0027193	Rab2a	94	45.545
MGP_CASTEiJ_G0034827	Rab39b	80	35.882	MGP_CASTEiJ_G0017200	Rab5b	78	35.882
MGP_CASTEiJ_G0034827	Rab39b	76	48.447	MGP_CASTEiJ_G0031541	Rab30	78	48.447
MGP_CASTEiJ_G0034827	Rab39b	81	39.884	MGP_CASTEiJ_G0023338	Rab18	83	39.884
MGP_CASTEiJ_G0034827	Rab39b	77	34.940	MGP_CASTEiJ_G0016681	Rab36	62	34.940
MGP_CASTEiJ_G0034827	Rab39b	86	35.519	MGP_CASTEiJ_G0026847	Nras	98	37.333
MGP_CASTEiJ_G0034827	Rab39b	77	36.585	MGP_CASTEiJ_G0023094	Rab5a	75	36.585
MGP_CASTEiJ_G0034827	Rab39b	75	48.171	MGP_CASTEiJ_G0034658	Rab33a	69	48.171
MGP_CASTEiJ_G0034827	Rab39b	73	36.538	MGP_CASTEiJ_G0015254	Rab23	65	36.538
MGP_CASTEiJ_G0034827	Rab39b	87	42.473	MGP_CASTEiJ_G0024846	Rab14	93	46.479
MGP_CASTEiJ_G0034827	Rab39b	77	36.585	MGP_CASTEiJ_G0018472	Rab5c	75	36.585
MGP_CASTEiJ_G0034827	Rab39b	84	43.820	MGP_CASTEiJ_G0017380	Rab1a	86	43.820