EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0035024 (Gene tree)
Gene ID: -
Gene Symbol: Cstf2
Alias: C630034J23Rik|Cstf64|mir-3112
Full Name: cleavage stimulation factor%2C 3' pre-RNA subunit 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 28257 bases
Position: chrX:112164643-112192899
Accession: 1343054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0097506	RRM_1	PF00076.22	2.5e-25	1	1
MGP_CASTEiJ_P0097504	RRM_1	PF00076.22	2.8e-25	1	1
MGP_CASTEiJ_P0097505	RRM_1	PF00076.22	3e-25	1	1
MGP_CASTEiJ_P0097509	RRM_1	PF00076.22	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0097511	-	574	-	MGP_CASTEiJ_P0097511	191 (aa)	-	-
MGP_CASTEiJ_T0097510	-	775	-	MGP_CASTEiJ_P0097510	258 (aa)	-	-
MGP_CASTEiJ_T0097504	-	3661	XM_006528478	MGP_CASTEiJ_P0097504	554 (aa)	XP_006528541	Q8BIQ5
MGP_CASTEiJ_T0097505	-	4502	-	MGP_CASTEiJ_P0097505	580 (aa)	-	-
MGP_CASTEiJ_T0097506	-	2717	-	MGP_CASTEiJ_P0097506	510 (aa)	-	-
MGP_CASTEiJ_T0097507	-	743	-	-	- (aa)	-	-
MGP_CASTEiJ_T0097508	-	7496	-	-	- (aa)	-	-
MGP_CASTEiJ_T0097509	-	552	-	MGP_CASTEiJ_P0097509	184 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0035024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0035024	Cstf2	86	87.342	MGP_CASTEiJ_G0024238	Cstf2t	99	63.927