EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0035043 (Gene tree)
Gene ID: -
Gene Symbol: Nxf2
Alias: 4930455N06Rik|NXF2|Nxf-b
Full Name: nuclear RNA export factor 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 22356 bases
Position: chrX:113089465-113111820
Accession: 1933192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0097582	Tap-RNA_bind	PF09162.10	1.8e-37	1	1
MGP_CASTEiJ_P0097580	Tap-RNA_bind	PF09162.10	1.9e-37	1	1
MGP_CASTEiJ_P0097581	Tap-RNA_bind	PF09162.10	1.9e-37	1	1
MGP_CASTEiJ_P0097582	TAP_C	PF03943.13	4.5e-22	1	1
MGP_CASTEiJ_P0097580	TAP_C	PF03943.13	4.7e-22	1	1
MGP_CASTEiJ_P0097581	TAP_C	PF03943.13	4.8e-22	1	1
MGP_CASTEiJ_P0097582	NTF2	PF02136.20	1.1e-09	1	1
MGP_CASTEiJ_P0097580	NTF2	PF02136.20	1.1e-09	1	1
MGP_CASTEiJ_P0097581	NTF2	PF02136.20	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0097580	-	2375	-	MGP_CASTEiJ_P0097580	685 (aa)	-	-
MGP_CASTEiJ_T0097581	-	2393	-	MGP_CASTEiJ_P0097581	691 (aa)	-	-
MGP_CASTEiJ_T0097582	-	2316	-	MGP_CASTEiJ_P0097582	671 (aa)	-	-
MGP_CASTEiJ_T0097579	-	1814	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0035043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0035043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0035043	Nxf2	90	36.304	MGP_CASTEiJ_G0035061	Nxf3	89	36.139
MGP_CASTEiJ_G0035043	Nxf2	83	52.985	MGP_CASTEiJ_G0035050	Nxf7	99	52.985
MGP_CASTEiJ_G0035043	Nxf2	82	54.511	MGP_CASTEiJ_G0024014	Nxf1	98	56.098