EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0035061 (Gene tree)
Gene ID: -
Gene Symbol: Nxf3
Alias: Gm384|LOC245610|NXF3
Full Name: nuclear RNA export factor 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 16071 bases
Position: chrX:114345371-114361441
Accession: 2685230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0097620	Tap-RNA_bind	PF09162.10	1.4e-31	1	1
MGP_CASTEiJ_P0097621	Tap-RNA_bind	PF09162.10	8e-05	1	1
MGP_CASTEiJ_P0097620	TAP_C	PF03943.13	1.1e-12	1	1
MGP_CASTEiJ_P0097620	NTF2	PF02136.20	2.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0097621	-	557	-	MGP_CASTEiJ_P0097621	103 (aa)	-	-
MGP_CASTEiJ_T0097620	-	2974	XM_006528530	MGP_CASTEiJ_P0097620	553 (aa)	XP_006528594	B1AUS0

Gene Model

Click here to download MGP_CASTEiJ_G0035061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0035061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0035061	Nxf3	91	38.652	MGP_CASTEiJ_G0024014	Nxf1	98	48.583
MGP_CASTEiJ_G0035061	Nxf3	90	37.523	MGP_CASTEiJ_G0035050	Nxf7	99	40.486
MGP_CASTEiJ_G0035061	Nxf3	89	36.139	MGP_CASTEiJ_G0035043	Nxf2	90	36.304