EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0015645 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 27607 bases
Position: chr1:34469754-34497360
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0018903	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_CBAJ_P0018907	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0018909	-	437	-	-	- (aa)	-	-
MGP_CBAJ_T0018908	-	1966	-	-	- (aa)	-	-
MGP_CBAJ_T0018901	-	444	-	-	- (aa)	-	-
MGP_CBAJ_T0018903	-	4322	-	MGP_CBAJ_P0018903	237 (aa)	-	-
MGP_CBAJ_T0018902	-	2557	-	-	- (aa)	-	-
MGP_CBAJ_T0018905	-	2047	-	-	- (aa)	-	-
MGP_CBAJ_T0018904	-	4398	-	MGP_CBAJ_P0018904	64 (aa)	-	-
MGP_CBAJ_T0018907	-	4218	-	MGP_CBAJ_P0018907	237 (aa)	-	-
MGP_CBAJ_T0018906	-	1087	-	-	- (aa)	-	-
MGP_CBAJ_T0018910	-	1764	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0015645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0015645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0015645	Rab23	75	32.961	MGP_CBAJ_G0019092	Rab37	81	32.961
MGP_CBAJ_G0015645	Rab23	77	31.383	MGP_CBAJ_G0035341	Rab33a	79	31.383
MGP_CBAJ_G0015645	Rab23	66	41.139	MGP_CBAJ_G0034845	Rab6b	76	41.139
MGP_CBAJ_G0015645	Rab23	75	32.086	MGP_CBAJ_G0029300	Rasl11b	74	32.086
MGP_CBAJ_G0015645	Rab23	74	37.500	MGP_CBAJ_G0032181	Rab30	87	37.500
MGP_CBAJ_G0015645	Rab23	65	36.129	MGP_CBAJ_G0029020	Rheb	84	36.129
MGP_CBAJ_G0015645	Rab23	61	31.507	MGP_CBAJ_G0032883	Hras	98	30.332
MGP_CBAJ_G0015645	Rab23	72	34.682	MGP_CBAJ_G0019579	Rab15	81	34.682
MGP_CBAJ_G0015645	Rab23	61	32.192	MGP_CBAJ_G0027365	Nras	95	35.862
MGP_CBAJ_G0015645	Rab23	72	35.465	MGP_CBAJ_G0023833	Rab18	83	35.465
MGP_CBAJ_G0015645	Rab23	65	34.375	MGP_CBAJ_G0035911	Rab9	79	34.375
MGP_CBAJ_G0015645	Rab23	70	34.337	MGP_CBAJ_G0024398	Rab1b	83	34.337
MGP_CBAJ_G0015645	Rab23	75	34.831	MGP_CBAJ_G0029638	Rab35	95	33.684
MGP_CBAJ_G0015645	Rab23	65	36.538	MGP_CBAJ_G0035514	Rab39b	73	36.538
MGP_CBAJ_G0015645	Rab23	64	38.462	MGP_CBAJ_G0018491	Rab34	60	38.462
MGP_CBAJ_G0015645	Rab23	67	37.500	MGP_CBAJ_G0017609	Rab5b	74	37.500
MGP_CBAJ_G0015645	Rab23	68	33.129	MGP_CBAJ_G0031247	Rasl2-9	74	33.129
MGP_CBAJ_G0015645	Rab23	70	33.918	MGP_CBAJ_G0030668	Rab7	94	43.478
MGP_CBAJ_G0015645	Rab23	80	30.890	MGP_CBAJ_G0023678	Rab31	93	30.890
MGP_CBAJ_G0015645	Rab23	66	37.654	MGP_CBAJ_G0035761	Rab9b	80	37.654
MGP_CBAJ_G0015645	Rab23	70	34.337	MGP_CBAJ_G0025362	Rab14	88	35.338
MGP_CBAJ_G0015645	Rab23	85	31.683	MGP_CBAJ_G0027089	Rab25	92	31.683
MGP_CBAJ_G0015645	Rab23	86	32.850	MGP_CBAJ_G0021002	Rab2b	94	32.850
MGP_CBAJ_G0015645	Rab23	67	38.125	MGP_CBAJ_G0023588	Rab5a	74	38.125
MGP_CBAJ_G0015645	Rab23	65	33.766	MGP_CBAJ_G0026654	Rab22a	79	33.766
MGP_CBAJ_G0015645	Rab23	80	32.984	MGP_CBAJ_G0034597	Rab11a	92	34.752
MGP_CBAJ_G0015645	Rab23	77	38.172	MGP_CBAJ_G0017083	Rab36	69	38.172
MGP_CBAJ_G0015645	Rab23	68	35.802	MGP_CBAJ_G0023237	Rab11b	95	35.802
MGP_CBAJ_G0015645	Rab23	74	35.227	MGP_CBAJ_G0018887	Rab5c	81	35.227
MGP_CBAJ_G0015645	Rab23	83	32.487	MGP_CBAJ_G0027714	Rab2a	95	31.863
MGP_CBAJ_G0015645	Rab23	67	31.765	MGP_CBAJ_G0030054	Rasl11a	69	31.765
MGP_CBAJ_G0015645	Rab23	69	35.119	MGP_CBAJ_G0023687	Rab12	57	35.119
MGP_CBAJ_G0015645	Rab23	65	31.410	MGP_CBAJ_G0031143	Kras	94	32.778
MGP_CBAJ_G0015645	Rab23	67	35.152	MGP_CBAJ_G0026890	Rab33b	72	35.152
MGP_CBAJ_G0015645	Rab23	51	33.884	MGP_CBAJ_G0029787	Ran	61	33.884
MGP_CBAJ_G0015645	Rab23	66	39.873	MGP_CBAJ_G0032241	Rab6a	76	39.873
MGP_CBAJ_G0015645	Rab23	70	34.337	MGP_CBAJ_G0017793	Rab1a	81	34.337