EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0016042 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 142595 bases
Position: chr1:99150799-99293393
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0020980	LRRFIP	PF09738.9	7.8e-106	1	1
MGP_CBAJ_P0020983	LRRFIP	PF09738.9	7e-90	1	2
MGP_CBAJ_P0020983	LRRFIP	PF09738.9	7e-90	2	2
MGP_CBAJ_P0020985	LRRFIP	PF09738.9	7.7e-90	1	3
MGP_CBAJ_P0020985	LRRFIP	PF09738.9	7.7e-90	2	3
MGP_CBAJ_P0020985	LRRFIP	PF09738.9	7.7e-90	3	3
MGP_CBAJ_P0020981	LRRFIP	PF09738.9	1.1e-89	1	2
MGP_CBAJ_P0020981	LRRFIP	PF09738.9	1.1e-89	2	2
MGP_CBAJ_P0020982	LRRFIP	PF09738.9	3.5e-84	1	1
MGP_CBAJ_P0020979	LRRFIP	PF09738.9	1.6e-81	1	3
MGP_CBAJ_P0020979	LRRFIP	PF09738.9	1.6e-81	2	3
MGP_CBAJ_P0020979	LRRFIP	PF09738.9	1.6e-81	3	3
MGP_CBAJ_P0020978	LRRFIP	PF09738.9	6.8e-66	1	2
MGP_CBAJ_P0020978	LRRFIP	PF09738.9	6.8e-66	2	2
MGP_CBAJ_P0020984	LRRFIP	PF09738.9	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0020988	-	215	-	-	- (aa)	-	-
MGP_CBAJ_T0020978	-	1031	XM_006529175	MGP_CBAJ_P0020978	323 (aa)	XP_006529238	Q3UZ39
MGP_CBAJ_T0020982	-	3645	-	MGP_CBAJ_P0020982	729 (aa)	-	-
MGP_CBAJ_T0020983	-	2760	-	MGP_CBAJ_P0020983	628 (aa)	-	-
MGP_CBAJ_T0020979	-	1744	-	MGP_CBAJ_P0020979	574 (aa)	-	-
MGP_CBAJ_T0020981	-	2879	-	MGP_CBAJ_P0020981	638 (aa)	-	-
MGP_CBAJ_T0020986	-	2642	-	-	- (aa)	-	-
MGP_CBAJ_T0020987	-	654	-	-	- (aa)	-	-
MGP_CBAJ_T0020984	-	447	-	MGP_CBAJ_P0020984	98 (aa)	-	-
MGP_CBAJ_T0020985	-	2152	-	MGP_CBAJ_P0020985	662 (aa)	-	-
MGP_CBAJ_T0020989	-	483	-	-	- (aa)	-	-
MGP_CBAJ_T0020980	-	2050	-	MGP_CBAJ_P0020980	428 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0016042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0016042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0016042	Lrrfip1	99	60.890	MGP_CBAJ_G0035021	Lrrfip2	100	67.630