EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0016083 (Gene tree)
Gene ID: -
Gene Symbol: Sept2
Alias: AW208991|Nedd-5|Nedd5|mKIAA0158
Full Name: septin 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 35163 bases
Position: chr1:101912762-101947924
Accession: 97298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0021176	MMR_HSR1	PF01926.23	9.6e-08	1	1
MGP_CBAJ_P0021181	MMR_HSR1	PF01926.23	9.7e-08	1	1
MGP_CBAJ_P0021182	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_CBAJ_P0021185	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_CBAJ_P0021175	MMR_HSR1	PF01926.23	1.3e-07	1	1
MGP_CBAJ_P0021177	MMR_HSR1	PF01926.23	1.4e-07	1	1
MGP_CBAJ_P0021183	MMR_HSR1	PF01926.23	1.4e-07	1	1
MGP_CBAJ_P0021184	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0021184	-	552	-	MGP_CBAJ_P0021184	177 (aa)	-	-
MGP_CBAJ_T0021185	-	779	-	MGP_CBAJ_P0021185	221 (aa)	-	-
MGP_CBAJ_T0021175	-	512	XM_006529240	MGP_CBAJ_P0021175	107 (aa)	XP_006529303	P42208
MGP_CBAJ_T0021176	-	730	-	MGP_CBAJ_P0021176	212 (aa)	-	-
MGP_CBAJ_T0021177	-	1997	-	MGP_CBAJ_P0021177	361 (aa)	-	-
MGP_CBAJ_T0021178	-	696	-	-	- (aa)	-	-
MGP_CBAJ_T0021179	-	424	-	MGP_CBAJ_P0021179	77 (aa)	-	-
MGP_CBAJ_T0021187	-	418	-	MGP_CBAJ_P0021187	44 (aa)	-	-
MGP_CBAJ_T0021186	-	466	-	-	- (aa)	-	-
MGP_CBAJ_T0021181	-	784	-	MGP_CBAJ_P0021181	213 (aa)	-	-
MGP_CBAJ_T0021180	-	3305	-	-	- (aa)	-	-
MGP_CBAJ_T0021183	-	477	-	MGP_CBAJ_P0021183	120 (aa)	-	-
MGP_CBAJ_T0021182	-	756	-	MGP_CBAJ_P0021182	221 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0016083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0016083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0016083	Sept2	100	49.778	MGP_CBAJ_G0019166	Sept9	88	49.767
MGP_CBAJ_G0016083	Sept2	100	50.000	MGP_CBAJ_G0021842	Sept3	89	49.007
MGP_CBAJ_G0016083	Sept2	100	65.421	MGP_CBAJ_G0018631	Sept4	97	66.230
MGP_CBAJ_G0016083	Sept2	100	42.202	MGP_CBAJ_G0029427	Sept11	69	43.234
MGP_CBAJ_G0016083	Sept2	100	64.486	MGP_CBAJ_G0022318	Sept5	92	60.059
MGP_CBAJ_G0016083	Sept2	100	62.037	MGP_CBAJ_G0034151	Sept7	65	62.887
MGP_CBAJ_G0016083	Sept2	100	41.818	MGP_CBAJ_G0018024	Sept8	70	42.812
MGP_CBAJ_G0016083	Sept2	100	48.148	MGP_CBAJ_G0022182	Sept12	81	43.077
MGP_CBAJ_G0016083	Sept2	100	41.284	MGP_CBAJ_G0035285	Sept6	70	43.234
MGP_CBAJ_G0016083	Sept2	100	41.228	MGP_CBAJ_G0016986	Sept10	67	43.144
MGP_CBAJ_G0016083	Sept2	100	60.748	MGP_CBAJ_G0032697	Sept1	100	64.828