EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0016154 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 14954 bases
Position: chr1:133595313-133610266
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0021488	ResIII	PF04851.15	4.5e-06	1	1
MGP_CBAJ_P0021488	DEAD	PF00270.29	1.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0021488	-	2258	XM_006529794	MGP_CBAJ_P0021488	660 (aa)	XP_006529857	Q8K363
MGP_CBAJ_T0021489	-	622	-	-	- (aa)	-	-
MGP_CBAJ_T0021491	-	451	-	-	- (aa)	-	-
MGP_CBAJ_T0021490	-	512	-	MGP_CBAJ_P0021490	170 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0016154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0016154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0016154	Ddx18	57	34.351	MGP_CBAJ_G0017036	Ddx50	51	34.351
MGP_CBAJ_G0016154	Ddx18	53	33.155	MGP_CBAJ_G0035227	Ddx3x	56	33.422
MGP_CBAJ_G0016154	Ddx18	50	34.111	MGP_CBAJ_G0020311	Ddx41	54	34.111
MGP_CBAJ_G0016154	Ddx18	50	31.818	MGP_CBAJ_G0018272	Eif4a1	84	32.609
MGP_CBAJ_G0016154	Ddx18	51	30.769	MGP_CBAJ_G0033503	Ddx39	81	30.312
MGP_CBAJ_G0016154	Ddx18	52	33.333	MGP_CBAJ_G0021780	Ddx17	53	33.333
MGP_CBAJ_G0016154	Ddx18	56	36.148	MGP_CBAJ_G0033366	Ddx49	92	38.066
MGP_CBAJ_G0016154	Ddx18	65	36.327	MGP_CBAJ_G0025245	Ddx31	72	36.327
MGP_CBAJ_G0016154	Ddx18	57	34.653	MGP_CBAJ_G0019198	Eif4a3	85	34.653
MGP_CBAJ_G0016154	Ddx18	55	38.525	MGP_CBAJ_G0031075	Ddx47	88	37.705
MGP_CBAJ_G0016154	Ddx18	61	38.462	MGP_CBAJ_G0026601	Ddx27	53	38.221
MGP_CBAJ_G0016154	Ddx18	50	30.628	MGP_CBAJ_G0029554	Ddx51	59	31.070
MGP_CBAJ_G0016154	Ddx18	68	36.192	MGP_CBAJ_G0029763	Ddx55	79	36.042
MGP_CBAJ_G0016154	Ddx18	64	32.294	MGP_CBAJ_G0029672	Ddx54	50	32.366
MGP_CBAJ_G0016154	Ddx18	55	32.990	MGP_CBAJ_G0018588	Ddx52	68	31.935
MGP_CBAJ_G0016154	Ddx18	56	34.974	MGP_CBAJ_G0034722	Ddx43	55	34.974
MGP_CBAJ_G0016154	Ddx18	53	33.144	MGP_CBAJ_G0016283	Ddx59	55	33.144
MGP_CBAJ_G0016154	Ddx18	66	46.241	MGP_CBAJ_G0034461	Ddx10	50	46.241
MGP_CBAJ_G0016154	Ddx18	53	33.155	MGP_CBAJ_G0016656	D1Pas1	56	33.155