EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0016230 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 6357 bases
Position: chr1:147117080-147123436
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0021838	LSM	PF01423.22	2.1e-17	1	1
MGP_CBAJ_P0021839	LSM	PF01423.22	8.9e-12	1	1
MGP_CBAJ_P0021840	LSM	PF01423.22	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0021840	-	75	-	MGP_CBAJ_P0021840	25 (aa)	-	-
MGP_CBAJ_T0021841	-	597	-	MGP_CBAJ_P0021841	69 (aa)	-	-
MGP_CBAJ_T0021837	-	653	-	MGP_CBAJ_P0021837	69 (aa)	-	P62305
MGP_CBAJ_T0021839	-	669	-	MGP_CBAJ_P0021839	91 (aa)	-	-
MGP_CBAJ_T0021838	-	279	-	MGP_CBAJ_P0021838	92 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0016230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0016230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0016230	Snrpe	77	32.877	MGP_CBAJ_G0030447	Lsm5	76	32.877