EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017036 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 44957 bases
Position: chr10:66687962-66732918
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0025152	GUCT	PF08152.12	4.7e-28	1	1
MGP_CBAJ_P0025152	ResIII	PF04851.15	5.8e-10	1	1
MGP_CBAJ_P0025152	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0025152	-	2527	XM_006514345	MGP_CBAJ_P0025152	734 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_CBAJ_G0017036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017036	Ddx50	50	45.238	MGP_CBAJ_G0019198	Eif4a3	80	46.341
MGP_CBAJ_G0017036	Ddx50	82	66.446	MGP_CBAJ_G0017035	Ddx21	71	64.217
MGP_CBAJ_G0017036	Ddx50	54	31.204	MGP_CBAJ_G0031075	Ddx47	94	30.175
MGP_CBAJ_G0017036	Ddx50	51	34.351	MGP_CBAJ_G0016154	Ddx18	57	34.351
MGP_CBAJ_G0017036	Ddx50	56	34.272	MGP_CBAJ_G0026601	Ddx27	52	34.129
MGP_CBAJ_G0017036	Ddx50	50	33.962	MGP_CBAJ_G0021780	Ddx17	55	33.962