EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017083 (Gene tree)
Gene ID: -
Gene Symbol: Rab36
Alias: 6330593L16Rik|AW047545
Full Name: RAB36%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 19865 bases
Position: chr10:80889322-80909186
Accession: 1924127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0025411	MMR_HSR1	PF01926.23	8.6e-06	1	1
MGP_CBAJ_P0025412	MMR_HSR1	PF01926.23	8.6e-06	1	1
MGP_CBAJ_P0025416	MMR_HSR1	PF01926.23	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0025413	-	2994	-	-	- (aa)	-	-
MGP_CBAJ_T0025412	-	2641	-	MGP_CBAJ_P0025412	267 (aa)	-	-
MGP_CBAJ_T0025411	-	3291	-	MGP_CBAJ_P0025411	267 (aa)	-	-
MGP_CBAJ_T0025410	-	952	-	-	- (aa)	-	-
MGP_CBAJ_T0025417	-	772	-	-	- (aa)	-	-
MGP_CBAJ_T0025416	-	2952	-	MGP_CBAJ_P0025416	267 (aa)	-	-
MGP_CBAJ_T0025415	-	576	-	MGP_CBAJ_P0025415	134 (aa)	-	-
MGP_CBAJ_T0025414	-	433	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0017083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017083	Rab36	65	35.955	MGP_CBAJ_G0035761	Rab9b	50	42.000
MGP_CBAJ_G0017083	Rab36	62	32.121	MGP_CBAJ_G0026654	Rab22a	84	32.121
MGP_CBAJ_G0017083	Rab36	83	58.559	MGP_CBAJ_G0018491	Rab34	86	58.559
MGP_CBAJ_G0017083	Rab36	62	34.940	MGP_CBAJ_G0035514	Rab39b	77	34.940
MGP_CBAJ_G0017083	Rab36	61	34.132	MGP_CBAJ_G0026890	Rab33b	54	37.903
MGP_CBAJ_G0017083	Rab36	64	37.427	MGP_CBAJ_G0025362	Rab14	77	40.171
MGP_CBAJ_G0017083	Rab36	63	36.571	MGP_CBAJ_G0030668	Rab7	92	43.333
MGP_CBAJ_G0017083	Rab36	79	33.649	MGP_CBAJ_G0024398	Rab1b	97	33.649
MGP_CBAJ_G0017083	Rab36	63	37.500	MGP_CBAJ_G0027714	Rab2a	78	37.500
MGP_CBAJ_G0017083	Rab36	80	36.620	MGP_CBAJ_G0034845	Rab6b	94	36.620
MGP_CBAJ_G0017083	Rab36	79	35.780	MGP_CBAJ_G0034597	Rab11a	94	35.780
MGP_CBAJ_G0017083	Rab36	61	37.654	MGP_CBAJ_G0021002	Rab2b	79	38.710
MGP_CBAJ_G0017083	Rab36	61	38.272	MGP_CBAJ_G0032181	Rab30	78	38.272
MGP_CBAJ_G0017083	Rab36	55	30.201	MGP_CBAJ_G0032883	Hras	83	30.625
MGP_CBAJ_G0017083	Rab36	77	30.244	MGP_CBAJ_G0023588	Rab5a	91	30.244
MGP_CBAJ_G0017083	Rab36	60	37.888	MGP_CBAJ_G0023237	Rab11b	69	42.857
MGP_CBAJ_G0017083	Rab36	80	36.150	MGP_CBAJ_G0032241	Rab6a	94	36.150
MGP_CBAJ_G0017083	Rab36	67	32.447	MGP_CBAJ_G0035341	Rab33a	51	36.885
MGP_CBAJ_G0017083	Rab36	60	33.750	MGP_CBAJ_G0023833	Rab18	56	38.793
MGP_CBAJ_G0017083	Rab36	79	33.175	MGP_CBAJ_G0017793	Rab1a	95	33.175
MGP_CBAJ_G0017083	Rab36	63	32.544	MGP_CBAJ_G0029787	Ran	81	33.728
MGP_CBAJ_G0017083	Rab36	61	36.196	MGP_CBAJ_G0019092	Rab37	74	36.196
MGP_CBAJ_G0017083	Rab36	68	38.122	MGP_CBAJ_G0027089	Rab25	54	43.590
MGP_CBAJ_G0017083	Rab36	69	38.172	MGP_CBAJ_G0015645	Rab23	77	38.172
MGP_CBAJ_G0017083	Rab36	60	35.000	MGP_CBAJ_G0017609	Rab5b	73	35.000
MGP_CBAJ_G0017083	Rab36	74	32.663	MGP_CBAJ_G0019579	Rab15	92	32.663
MGP_CBAJ_G0017083	Rab36	62	38.554	MGP_CBAJ_G0029638	Rab35	97	33.649
MGP_CBAJ_G0017083	Rab36	60	35.625	MGP_CBAJ_G0018887	Rab5c	73	35.625
MGP_CBAJ_G0017083	Rab36	58	33.758	MGP_CBAJ_G0031247	Rasl2-9	70	33.758