EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0017221 (Gene tree)
Gene ID
-
Gene Symbol
Cirbp
Alias
Cirp|R74941
Full Name
cold inducible RNA binding protein
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Plus strand
Length
10355 bases
Position
chr10:86773094-86783448
Accession
893588
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0025880RRM_1PF00076.225e-2611
MGP_CBAJ_P0025882RRM_1PF00076.221.2e-2511
MGP_CBAJ_P0025881RRM_1PF00076.221.3e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0025880-423XM_006513164MGP_CBAJ_P0025880108 (aa)XP_006513227P60824
MGP_CBAJ_T0025881-1321-MGP_CBAJ_P0025881172 (aa)--
MGP_CBAJ_T0025882-872-MGP_CBAJ_P0025882168 (aa)--
MGP_CBAJ_T0025883-376--- (aa)--
MGP_CBAJ_T0025884-912--- (aa)--
MGP_CBAJ_T0025885-894--- (aa)--
MGP_CBAJ_T0025886-593--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0017221's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017221's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0017221Cirbp8431.868MGP_CBAJ_G0026507Srsf66131.868
MGP_CBAJ_G0017221Cirbp8538.043MGP_CBAJ_G0022427Ncbp25436.471
MGP_CBAJ_G0017221Cirbp7963.529MGP_CBAJ_G0035395Rbmx8363.529
MGP_CBAJ_G0017221Cirbp7962.353MGP_CBAJ_G0033470-7255.455
MGP_CBAJ_G0017221Cirbp8438.889MGP_CBAJ_G0028241Elavl47038.889
MGP_CBAJ_G0017221Cirbp8233.333MGP_CBAJ_G0033001Elavl17533.333
MGP_CBAJ_G0017221Cirbp7336.709MGP_CBAJ_G0029451Hnrnpdl5436.709
MGP_CBAJ_G0017221Cirbp7637.500MGP_CBAJ_G0028108Elavl26437.500
MGP_CBAJ_G0017221Cirbp6834.247MGP_CBAJ_G0021107Pspc16941.304
MGP_CBAJ_G0017221Cirbp8540.244MGP_CBAJ_G0032753Tial16740.244
MGP_CBAJ_G0017221Cirbp9960.588MGP_CBAJ_G0035193Rbm310063.529
MGP_CBAJ_G0017221Cirbp7937.500MGP_CBAJ_G0034128Elavl36237.500
MGP_CBAJ_G0017221Cirbp7840.476MGP_CBAJ_G0026647Rbm387438.043
MGP_CBAJ_G0017221Cirbp9242.105MGP_CBAJ_G0017227Dazap17447.273
MGP_CBAJ_G0017221Cirbp8740.351MGP_CBAJ_G0029632Msi15138.983
MGP_CBAJ_G0017221Cirbp9438.614MGP_CBAJ_G0020336Hnrnpa05643.421
MGP_CBAJ_G0017221Cirbp8032.558MGP_CBAJ_G0025044Celf28233.333
MGP_CBAJ_G0017221Cirbp8843.243MGP_CBAJ_G0018650Msi26141.429
MGP_CBAJ_G0017221Cirbp9139.759MGP_CBAJ_G0026528Pabpc1l5339.759
MGP_CBAJ_G0017221Cirbp7044.737MGP_CBAJ_G0030402Hnrnpa2b15044.737
MGP_CBAJ_G0017221Cirbp9135.714MGP_CBAJ_G0030638Tia18037.778
MGP_CBAJ_G0017221Cirbp8338.776MGP_CBAJ_G0029449Hnrnpd8436.559

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