EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017295 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 31372 bases
Position: chr10:88330309-88361680
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0026169	RRM_1	PF00076.22	2.2e-31	1	2
MGP_CBAJ_P0026169	RRM_1	PF00076.22	2.2e-31	2	2
MGP_CBAJ_P0026166	RRM_1	PF00076.22	2.2e-31	1	2
MGP_CBAJ_P0026166	RRM_1	PF00076.22	2.2e-31	2	2
MGP_CBAJ_P0026168	RRM_1	PF00076.22	2.2e-15	1	1
MGP_CBAJ_P0026167	RRM_1	PF00076.22	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0026168	-	3861	-	MGP_CBAJ_P0026168	318 (aa)	-	-
MGP_CBAJ_T0026169	-	2042	-	MGP_CBAJ_P0026169	394 (aa)	-	-
MGP_CBAJ_T0026166	-	4391	XM_006513743	MGP_CBAJ_P0026166	395 (aa)	XP_006513806	D3Z4C5
MGP_CBAJ_T0026167	-	4166	-	MGP_CBAJ_P0026167	319 (aa)	-	-
MGP_CBAJ_T0026171	-	945	-	-	- (aa)	-	-
MGP_CBAJ_T0026170	-	605	-	-	- (aa)	-	-
MGP_CBAJ_T0026172	-	748	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0017295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017295	Celf5	89	63.920	MGP_CBAJ_G0027235	Celf3	100	67.213
MGP_CBAJ_G0017295	Celf5	52	53.659	MGP_CBAJ_G0025044	Celf2	92	53.659
MGP_CBAJ_G0017295	Celf5	95	60.477	MGP_CBAJ_G0034556	Celf6	75	85.401
MGP_CBAJ_G0017295	Celf5	85	66.667	MGP_CBAJ_G0023910	Celf4	84	63.333