EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017609 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 28919 bases
Position: chr10:142497857-142526775
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0027221	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0027221	-	3021	XM_006513384	MGP_CBAJ_P0027221	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_CBAJ_G0017609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017609	Rab5b	91	37.949	MGP_CBAJ_G0027714	Rab2a	76	43.478
MGP_CBAJ_G0017609	Rab5b	74	37.195	MGP_CBAJ_G0021943	Rabl2	72	37.195
MGP_CBAJ_G0017609	Rab5b	55	30.159	MGP_CBAJ_G0019419	Arl4a	60	30.159
MGP_CBAJ_G0017609	Rab5b	90	35.323	MGP_CBAJ_G0035761	Rab9b	97	35.323
MGP_CBAJ_G0017609	Rab5b	97	86.124	MGP_CBAJ_G0018887	Rab5c	97	86.124
MGP_CBAJ_G0017609	Rab5b	90	47.938	MGP_CBAJ_G0026654	Rab22a	98	47.938
MGP_CBAJ_G0017609	Rab5b	77	42.941	MGP_CBAJ_G0030668	Rab7	90	47.727
MGP_CBAJ_G0017609	Rab5b	74	37.500	MGP_CBAJ_G0015645	Rab23	67	37.500
MGP_CBAJ_G0017609	Rab5b	84	30.220	MGP_CBAJ_G0027365	Nras	99	33.333
MGP_CBAJ_G0017609	Rab5b	62	30.986	MGP_CBAJ_G0030768	Arl8b	73	30.986
MGP_CBAJ_G0017609	Rab5b	90	38.462	MGP_CBAJ_G0023833	Rab18	93	38.462
MGP_CBAJ_G0017609	Rab5b	72	48.701	MGP_CBAJ_G0023237	Rab11b	91	48.701
MGP_CBAJ_G0017609	Rab5b	83	37.705	MGP_CBAJ_G0035341	Rab33a	77	37.705
MGP_CBAJ_G0017609	Rab5b	73	35.000	MGP_CBAJ_G0017083	Rab36	60	35.000
MGP_CBAJ_G0017609	Rab5b	82	45.198	MGP_CBAJ_G0024398	Rab1b	87	45.198
MGP_CBAJ_G0017609	Rab5b	91	47.959	MGP_CBAJ_G0023678	Rab31	98	47.959
MGP_CBAJ_G0017609	Rab5b	82	32.787	MGP_CBAJ_G0032883	Hras	96	32.787
MGP_CBAJ_G0017609	Rab5b	80	32.558	MGP_CBAJ_G0029787	Ran	82	32.558
MGP_CBAJ_G0017609	Rab5b	86	40.761	MGP_CBAJ_G0021002	Rab2b	85	40.761
MGP_CBAJ_G0017609	Rab5b	78	35.882	MGP_CBAJ_G0035514	Rab39b	80	35.882
MGP_CBAJ_G0017609	Rab5b	62	30.986	MGP_CBAJ_G0016259	Arl8a	73	30.986
MGP_CBAJ_G0017609	Rab5b	82	39.344	MGP_CBAJ_G0026890	Rab33b	79	39.130
MGP_CBAJ_G0017609	Rab5b	93	35.294	MGP_CBAJ_G0035911	Rab9	99	35.294
MGP_CBAJ_G0017609	Rab5b	85	35.326	MGP_CBAJ_G0023687	Rab12	63	35.326
MGP_CBAJ_G0017609	Rab5b	82	33.333	MGP_CBAJ_G0029020	Rheb	93	33.333
MGP_CBAJ_G0017609	Rab5b	75	45.963	MGP_CBAJ_G0027089	Rab25	76	45.963
MGP_CBAJ_G0017609	Rab5b	78	42.857	MGP_CBAJ_G0032181	Rab30	83	42.857
MGP_CBAJ_G0017609	Rab5b	90	43.367	MGP_CBAJ_G0017793	Rab1a	95	43.367
MGP_CBAJ_G0017609	Rab5b	75	47.205	MGP_CBAJ_G0034597	Rab11a	88	48.889
MGP_CBAJ_G0017609	Rab5b	100	81.860	MGP_CBAJ_G0023588	Rab5a	100	81.860
MGP_CBAJ_G0017609	Rab5b	80	33.333	MGP_CBAJ_G0031247	Rasl2-9	76	33.333
MGP_CBAJ_G0017609	Rab5b	77	45.181	MGP_CBAJ_G0032241	Rab6a	80	45.181
MGP_CBAJ_G0017609	Rab5b	77	45.783	MGP_CBAJ_G0034845	Rab6b	80	45.783
MGP_CBAJ_G0017609	Rab5b	77	32.335	MGP_CBAJ_G0031143	Kras	88	32.335
MGP_CBAJ_G0017609	Rab5b	94	41.827	MGP_CBAJ_G0019092	Rab37	93	41.827
MGP_CBAJ_G0017609	Rab5b	82	36.932	MGP_CBAJ_G0019579	Rab15	83	36.932
MGP_CBAJ_G0017609	Rab5b	75	44.720	MGP_CBAJ_G0025362	Rab14	89	41.481
MGP_CBAJ_G0017609	Rab5b	90	37.949	MGP_CBAJ_G0029638	Rab35	96	37.949