EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017793 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 32920 bases
Position: chr11:19320256-19353175
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0027838	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0027837	-	710	-	-	- (aa)	-	-
MGP_CBAJ_T0027836	-	962	-	-	- (aa)	-	-
MGP_CBAJ_T0027838	-	2585	-	MGP_CBAJ_P0027838	205 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0017793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017793	Rab1a	90	48.108	MGP_CBAJ_G0027714	Rab2a	99	45.238
MGP_CBAJ_G0017793	Rab1a	80	50.909	MGP_CBAJ_G0019579	Rab15	78	50.909
MGP_CBAJ_G0017793	Rab1a	81	34.337	MGP_CBAJ_G0015645	Rab23	70	34.337
MGP_CBAJ_G0017793	Rab1a	58	34.454	MGP_CBAJ_G0016259	Arl8a	62	34.454
MGP_CBAJ_G0017793	Rab1a	99	53.960	MGP_CBAJ_G0029638	Rab35	100	53.960
MGP_CBAJ_G0017793	Rab1a	77	40.491	MGP_CBAJ_G0018491	Rab34	62	40.491
MGP_CBAJ_G0017793	Rab1a	86	43.820	MGP_CBAJ_G0035514	Rab39b	84	43.820
MGP_CBAJ_G0017793	Rab1a	79	31.902	MGP_CBAJ_G0031247	Rasl2-9	73	31.902
MGP_CBAJ_G0017793	Rab1a	76	38.994	MGP_CBAJ_G0035761	Rab9b	79	38.994
MGP_CBAJ_G0017793	Rab1a	82	50.296	MGP_CBAJ_G0023687	Rab12	58	50.296
MGP_CBAJ_G0017793	Rab1a	99	44.554	MGP_CBAJ_G0025362	Rab14	97	47.619
MGP_CBAJ_G0017793	Rab1a	75	37.580	MGP_CBAJ_G0021943	Rabl2	67	37.580
MGP_CBAJ_G0017793	Rab1a	57	33.058	MGP_CBAJ_G0024457	Arl2	61	33.058
MGP_CBAJ_G0017793	Rab1a	95	43.590	MGP_CBAJ_G0018887	Rab5c	89	43.590
MGP_CBAJ_G0017793	Rab1a	57	31.092	MGP_CBAJ_G0016030	Arl4c	61	31.092
MGP_CBAJ_G0017793	Rab1a	94	45.361	MGP_CBAJ_G0023833	Rab18	93	45.361
MGP_CBAJ_G0017793	Rab1a	83	43.429	MGP_CBAJ_G0026890	Rab33b	76	43.429
MGP_CBAJ_G0017793	Rab1a	83	32.749	MGP_CBAJ_G0029787	Ran	84	32.749
MGP_CBAJ_G0017793	Rab1a	81	50.602	MGP_CBAJ_G0032181	Rab30	82	50.602
MGP_CBAJ_G0017793	Rab1a	62	30.303	MGP_CBAJ_G0026986	Arl14	65	30.303
MGP_CBAJ_G0017793	Rab1a	80	36.527	MGP_CBAJ_G0034821	Mras	80	36.527
MGP_CBAJ_G0017793	Rab1a	80	38.415	MGP_CBAJ_G0027365	Nras	96	39.041
MGP_CBAJ_G0017793	Rab1a	95	43.814	MGP_CBAJ_G0023588	Rab5a	90	43.814
MGP_CBAJ_G0017793	Rab1a	82	45.833	MGP_CBAJ_G0027089	Rab25	79	45.833
MGP_CBAJ_G0017793	Rab1a	85	52.299	MGP_CBAJ_G0034597	Rab11a	100	50.000
MGP_CBAJ_G0017793	Rab1a	80	38.415	MGP_CBAJ_G0031143	Kras	97	35.676
MGP_CBAJ_G0017793	Rab1a	69	30.201	MGP_CBAJ_G0018930	Arl4d	73	30.201
MGP_CBAJ_G0017793	Rab1a	68	30.496	MGP_CBAJ_G0024922	Arl3	72	30.496
MGP_CBAJ_G0017793	Rab1a	94	43.434	MGP_CBAJ_G0035341	Rab33a	83	43.434
MGP_CBAJ_G0017793	Rab1a	94	38.384	MGP_CBAJ_G0032241	Rab6a	94	38.384
MGP_CBAJ_G0017793	Rab1a	97	46.465	MGP_CBAJ_G0021002	Rab2b	92	46.465
MGP_CBAJ_G0017793	Rab1a	94	36.410	MGP_CBAJ_G0034845	Rab6b	94	36.410
MGP_CBAJ_G0017793	Rab1a	82	32.544	MGP_CBAJ_G0029020	Rheb	91	32.544
MGP_CBAJ_G0017793	Rab1a	95	33.175	MGP_CBAJ_G0017083	Rab36	79	33.175
MGP_CBAJ_G0017793	Rab1a	90	39.785	MGP_CBAJ_G0023678	Rab31	95	39.785
MGP_CBAJ_G0017793	Rab1a	84	35.028	MGP_CBAJ_G0032883	Hras	93	35.028
MGP_CBAJ_G0017793	Rab1a	57	31.933	MGP_CBAJ_G0019419	Arl4a	59	31.933
MGP_CBAJ_G0017793	Rab1a	81	45.238	MGP_CBAJ_G0019092	Rab37	78	45.238
MGP_CBAJ_G0017793	Rab1a	95	38.660	MGP_CBAJ_G0026654	Rab22a	97	38.660
MGP_CBAJ_G0017793	Rab1a	81	38.235	MGP_CBAJ_G0030668	Rab7	98	39.583
MGP_CBAJ_G0017793	Rab1a	76	38.994	MGP_CBAJ_G0035911	Rab9	79	38.994
MGP_CBAJ_G0017793	Rab1a	95	43.367	MGP_CBAJ_G0017609	Rab5b	90	43.367
MGP_CBAJ_G0017793	Rab1a	99	92.079	MGP_CBAJ_G0024398	Rab1b	100	92.079
MGP_CBAJ_G0017793	Rab1a	80	52.727	MGP_CBAJ_G0023237	Rab11b	97	52.727
MGP_CBAJ_G0017793	Rab1a	57	32.203	MGP_CBAJ_G0030768	Arl8b	61	32.203