EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0017981 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 14657 bases
Position: chr11:53932297-53946953
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_CBAJ_P0028565	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_CBAJ_P0028565	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0028568	-	606	-	-	- (aa)	-	-
MGP_CBAJ_T0028565	-	1611	XM_006533208	MGP_CBAJ_P0028565	536 (aa)	XP_006533271	Q5NCH5
MGP_CBAJ_T0028566	-	579	-	-	- (aa)	-	-
MGP_CBAJ_T0028567	-	722	-	MGP_CBAJ_P0028567	122 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0017981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0017981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0017981	Zfp454	99	44.019	MGP_CBAJ_G0032707	E430018J23Rik	89	45.385
MGP_CBAJ_G0017981	Zfp454	98	46.075	MGP_CBAJ_G0032704	-	93	46.075
MGP_CBAJ_G0017981	Zfp454	68	51.095	MGP_CBAJ_G0032703	Zfp768	51	50.523
MGP_CBAJ_G0017981	Zfp454	98	50.523	MGP_CBAJ_G0031493	Zfp94	97	50.523
MGP_CBAJ_G0017981	Zfp454	76	53.448	MGP_CBAJ_G0031492	Zfp61	59	66.667
MGP_CBAJ_G0017981	Zfp454	80	53.125	MGP_CBAJ_G0031491	Zfp93	64	53.125
MGP_CBAJ_G0017981	Zfp454	98	50.836	MGP_CBAJ_G0031490	Zfp108	99	50.836
MGP_CBAJ_G0017981	Zfp454	67	51.309	MGP_CBAJ_G0031229	Zfp628	60	49.451
MGP_CBAJ_G0017981	Zfp454	99	49.485	MGP_CBAJ_G0022928	Zfp677	99	49.315
MGP_CBAJ_G0017981	Zfp454	68	45.745	MGP_CBAJ_G0026625	Zfp64	73	35.125
MGP_CBAJ_G0017981	Zfp454	65	42.424	MGP_CBAJ_G0028710	Zbtb17	55	43.322
MGP_CBAJ_G0017981	Zfp454	67	42.623	MGP_CBAJ_G0031237	Zfp865	80	36.486
MGP_CBAJ_G0017981	Zfp454	87	48.199	MGP_CBAJ_G0031792	Zfp715	61	57.778
MGP_CBAJ_G0017981	Zfp454	86	49.080	MGP_CBAJ_G0020404	Rslcan18	87	49.080
MGP_CBAJ_G0017981	Zfp454	68	38.571	MGP_CBAJ_G0030499	Prdm5	78	38.571
MGP_CBAJ_G0017981	Zfp454	69	39.130	MGP_CBAJ_G0018713	Zfp652	56	38.596
MGP_CBAJ_G0017981	Zfp454	99	53.604	MGP_CBAJ_G0021719	Zfp251	95	51.948
MGP_CBAJ_G0017981	Zfp454	82	36.599	MGP_CBAJ_G0030369	Repin1	92	35.252
MGP_CBAJ_G0017981	Zfp454	98	42.508	MGP_CBAJ_G0026587	Zfp334	99	44.615
MGP_CBAJ_G0017981	Zfp454	65	36.493	MGP_CBAJ_G0031240	Zfp784	71	36.493
MGP_CBAJ_G0017981	Zfp454	70	41.854	MGP_CBAJ_G0022959	Zscan10	75	44.554
MGP_CBAJ_G0017981	Zfp454	99	45.822	MGP_CBAJ_G0022951	Zfp945	99	46.197
MGP_CBAJ_G0017981	Zfp454	100	55.405	MGP_CBAJ_G0026162	Zfp661	98	55.405
MGP_CBAJ_G0017981	Zfp454	71	57.803	MGP_CBAJ_G0031659	Zfp420	98	59.532
MGP_CBAJ_G0017981	Zfp454	98	48.828	MGP_CBAJ_G0033801	Zfp1	99	48.828
MGP_CBAJ_G0017981	Zfp454	75	42.982	MGP_CBAJ_G0024306	Zfp236	63	42.697
MGP_CBAJ_G0017981	Zfp454	68	38.320	MGP_CBAJ_G0018076	Zfp672	90	42.029
MGP_CBAJ_G0017981	Zfp454	70	48.626	MGP_CBAJ_G0031596	Zfp780b	79	57.377
MGP_CBAJ_G0017981	Zfp454	100	47.175	MGP_CBAJ_G0022930	Zfp51	95	60.714
MGP_CBAJ_G0017981	Zfp454	70	35.714	MGP_CBAJ_G0031523	Zfp574	88	37.500
MGP_CBAJ_G0017981	Zfp454	80	52.722	MGP_CBAJ_G0020428	-	59	56.250
MGP_CBAJ_G0017981	Zfp454	98	41.509	MGP_CBAJ_G0033432	Zfp882	99	44.110
MGP_CBAJ_G0017981	Zfp454	66	49.112	MGP_CBAJ_G0033431	Zfp709	89	49.112
MGP_CBAJ_G0017981	Zfp454	68	42.262	MGP_CBAJ_G0029510	Gfi1	100	45.794
MGP_CBAJ_G0017981	Zfp454	65	47.423	MGP_CBAJ_G0029174	Zbtb49	63	50.000
MGP_CBAJ_G0017981	Zfp454	98	46.667	MGP_CBAJ_G0034135	Zfp872	99	46.667
MGP_CBAJ_G0017981	Zfp454	69	60.345	MGP_CBAJ_G0030842	Zfp637	80	55.208
MGP_CBAJ_G0017981	Zfp454	98	49.008	MGP_CBAJ_G0031485	Zfp112	72	57.143
MGP_CBAJ_G0017981	Zfp454	82	57.778	MGP_CBAJ_G0031486	Zfp235	78	57.778
MGP_CBAJ_G0017981	Zfp454	69	37.600	MGP_CBAJ_G0033644	Zfp319	91	37.989
MGP_CBAJ_G0017981	Zfp454	98	48.406	MGP_CBAJ_G0018126	Zfp867	82	49.583
MGP_CBAJ_G0017981	Zfp454	98	52.692	MGP_CBAJ_G0020405	Zfp759	100	52.692