EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018002 (Gene tree)
Gene ID: -
Gene Symbol: Sar1b
Alias: 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 28184 bases
Position: chr11:55039449-55067632
Accession: 1913647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0028640	MMR_HSR1	PF01926.23	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0028641	-	377	-	-	- (aa)	-	-
MGP_CBAJ_T0028640	-	1201	-	MGP_CBAJ_P0028640	198 (aa)	-	Q9CQC9

Gene Model

Click here to download MGP_CBAJ_G0018002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018002	Sar1b	52	37.143	MGP_CBAJ_G0022635	Arl6	54	37.143
MGP_CBAJ_G0018002	Sar1b	64	33.333	MGP_CBAJ_G0016030	Arl4c	69	33.333
MGP_CBAJ_G0018002	Sar1b	61	39.535	MGP_CBAJ_G0018930	Arl4d	64	39.535
MGP_CBAJ_G0018002	Sar1b	86	34.503	MGP_CBAJ_G0021148	Arl11	90	34.503
MGP_CBAJ_G0018002	Sar1b	72	33.566	MGP_CBAJ_G0024457	Arl2	78	33.566
MGP_CBAJ_G0018002	Sar1b	55	31.818	MGP_CBAJ_G0020280	Arl10	53	31.818
MGP_CBAJ_G0018002	Sar1b	88	31.818	MGP_CBAJ_G0026986	Arl14	86	31.818
MGP_CBAJ_G0018002	Sar1b	69	33.333	MGP_CBAJ_G0018120	Arf1	76	33.333
MGP_CBAJ_G0018002	Sar1b	73	34.228	MGP_CBAJ_G0019419	Arl4a	74	34.228
MGP_CBAJ_G0018002	Sar1b	100	90.909	MGP_CBAJ_G0017018	Sar1a	100	90.909
MGP_CBAJ_G0018002	Sar1b	77	30.519	MGP_CBAJ_G0030768	Arl8b	78	30.519
MGP_CBAJ_G0018002	Sar1b	67	32.576	MGP_CBAJ_G0018991	Arf2	73	32.576