EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018015 (Gene tree)
Gene ID: -
Gene Symbol: Aff4
Alias: AF5Q31|Alf4|Laf4l|MCEF
Full Name: AF4/FMR2 family%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 86151 bases
Position: chr11:56881933-56968083
Accession: 2136171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0028690	AF-4	PF05110.13	0	1	1
MGP_CBAJ_P0028691	AF-4	PF05110.13	3.7e-47	1	1
MGP_CBAJ_P0028694	AF-4	PF05110.13	6.5e-39	1	2
MGP_CBAJ_P0028694	AF-4	PF05110.13	6.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0028696	-	687	-	-	- (aa)	-	-
MGP_CBAJ_T0028697	-	933	-	-	- (aa)	-	-
MGP_CBAJ_T0028694	-	476	-	MGP_CBAJ_P0028694	158 (aa)	-	-
MGP_CBAJ_T0028695	-	429	-	-	- (aa)	-	-
MGP_CBAJ_T0028692	-	3818	-	-	- (aa)	-	-
MGP_CBAJ_T0028693	-	600	-	-	- (aa)	-	-
MGP_CBAJ_T0028690	-	10099	XM_006534560	MGP_CBAJ_P0028690	1160 (aa)	XP_006534623	Q9ESC8
MGP_CBAJ_T0028691	-	464	-	MGP_CBAJ_P0028691	122 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0018015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018015	Aff4	94	54.074	MGP_CBAJ_G0035422	Aff2	64	53.160
MGP_CBAJ_G0018015	Aff4	74	57.143	MGP_CBAJ_G0015693	Aff3	83	35.742