EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018272 (Gene tree)
Gene ID: -
Gene Symbol: Eif4a1
Alias: BM-010|Ddx2a|Eif4|Eif4a|initiation factor eIF-4A long form
Full Name: eukaryotic translation initiation factor 4A1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 8081 bases
Position: chr11:75480779-75488859
Accession: 95303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0029687	ResIII	PF04851.15	1.5e-06	1	1
MGP_CBAJ_P0029687	DEAD	PF00270.29	7.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0029694	-	403	-	-	- (aa)	-	-
MGP_CBAJ_T0029699	-	802	-	-	- (aa)	-	-
MGP_CBAJ_T0029698	-	453	-	-	- (aa)	-	-
MGP_CBAJ_T0029688	-	1797	-	-	- (aa)	-	-
MGP_CBAJ_T0029689	-	3119	-	-	- (aa)	-	-
MGP_CBAJ_T0029691	-	386	-	-	- (aa)	-	-
MGP_CBAJ_T0029690	-	807	-	-	- (aa)	-	-
MGP_CBAJ_T0029693	-	813	-	MGP_CBAJ_P0029693	50 (aa)	-	-
MGP_CBAJ_T0029692	-	704	-	-	- (aa)	-	-
MGP_CBAJ_T0029695	-	493	-	-	- (aa)	-	-
MGP_CBAJ_T0029687	-	1985	-	MGP_CBAJ_P0029687	468 (aa)	-	P60843
MGP_CBAJ_T0029697	-	401	-	-	- (aa)	-	-
MGP_CBAJ_T0029696	-	484	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0018272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018272	Eif4a1	91	74.667	MGP_CBAJ_G0019198	Eif4a3	89	67.606
MGP_CBAJ_G0018272	Eif4a1	90	36.482	MGP_CBAJ_G0023338	Ddx39b	82	36.441
MGP_CBAJ_G0018272	Eif4a1	89	37.963	MGP_CBAJ_G0020311	Ddx41	55	37.079
MGP_CBAJ_G0018272	Eif4a1	88	30.841	MGP_CBAJ_G0016283	Ddx59	57	30.841
MGP_CBAJ_G0018272	Eif4a1	89	38.095	MGP_CBAJ_G0016656	D1Pas1	57	38.095
MGP_CBAJ_G0018272	Eif4a1	91	48.837	MGP_CBAJ_G0034191	Ddx25	74	48.837
MGP_CBAJ_G0018272	Eif4a1	86	41.667	MGP_CBAJ_G0031075	Ddx47	84	42.424
MGP_CBAJ_G0018272	Eif4a1	87	40.952	MGP_CBAJ_G0033366	Ddx49	94	37.647
MGP_CBAJ_G0018272	Eif4a1	93	36.441	MGP_CBAJ_G0033503	Ddx39	84	39.655
MGP_CBAJ_G0018272	Eif4a1	92	32.479	MGP_CBAJ_G0029763	Ddx55	59	30.392
MGP_CBAJ_G0018272	Eif4a1	78	45.161	MGP_CBAJ_G0019033	Ddx5	78	37.500
MGP_CBAJ_G0018272	Eif4a1	54	90.514	MGP_CBAJ_G0022380	Eif4a2	69	90.514
MGP_CBAJ_G0018272	Eif4a1	88	44.762	MGP_CBAJ_G0021780	Ddx17	51	44.186
MGP_CBAJ_G0018272	Eif4a1	92	37.594	MGP_CBAJ_G0034722	Ddx43	55	37.594
MGP_CBAJ_G0018272	Eif4a1	89	38.095	MGP_CBAJ_G0035227	Ddx3x	57	38.095
MGP_CBAJ_G0018272	Eif4a1	87	43.396	MGP_CBAJ_G0018588	Ddx52	59	43.396
MGP_CBAJ_G0018272	Eif4a1	84	32.609	MGP_CBAJ_G0016154	Ddx18	50	31.818
MGP_CBAJ_G0018272	Eif4a1	88	36.190	MGP_CBAJ_G0033733	Ddx28	66	34.118
MGP_CBAJ_G0018272	Eif4a1	90	32.898	MGP_CBAJ_G0033790	Ddx19a	75	33.333