EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018311 (Gene tree)
Gene ID: -
Gene Symbol: Bcl6b
Alias: Bazf
Full Name: B cell CLL/lymphoma 6%2C member B
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr11:76153128-76158798
Accession: 1278332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0029877	zf-C2H2	PF00096.26	6.8e-16	1	2
MGP_CBAJ_P0029877	zf-C2H2	PF00096.26	6.8e-16	2	2
MGP_CBAJ_P0029877	zf-met	PF12874.7	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0029879	-	652	-	-	- (aa)	-	-
MGP_CBAJ_T0029878	-	384	-	MGP_CBAJ_P0029878	116 (aa)	-	-
MGP_CBAJ_T0029877	-	3366	-	MGP_CBAJ_P0029877	474 (aa)	-	O88282

Gene Model

Click here to download MGP_CBAJ_G0018311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018311	Bcl6b	96	52.713	MGP_CBAJ_G0022390	Bcl6	69	52.756
MGP_CBAJ_G0018311	Bcl6b	68	45.312	MGP_CBAJ_G0028710	Zbtb17	74	44.444
MGP_CBAJ_G0018311	Bcl6b	56	49.645	MGP_CBAJ_G0026814	Mynn	86	49.645
MGP_CBAJ_G0018311	Bcl6b	54	48.148	MGP_CBAJ_G0020405	Zfp759	88	48.148
MGP_CBAJ_G0018311	Bcl6b	96	32.692	MGP_CBAJ_G0020679	Zfp131	50	36.667
MGP_CBAJ_G0018311	Bcl6b	94	40.299	MGP_CBAJ_G0016906	Zbtb24	71	37.640
MGP_CBAJ_G0018311	Bcl6b	61	47.794	MGP_CBAJ_G0022930	Zfp51	81	47.794
MGP_CBAJ_G0018311	Bcl6b	97	34.483	MGP_CBAJ_G0025406	Zbtb6	97	34.483
MGP_CBAJ_G0018311	Bcl6b	54	47.368	MGP_CBAJ_G0029174	Zbtb49	60	45.714
MGP_CBAJ_G0018311	Bcl6b	82	38.739	MGP_CBAJ_G0022528	Zbtb20	61	38.739