EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Description

Ensembl ID: MGP_CBAJ_G0018437 (Gene tree)
Gene ID: -
Gene Symbol: Prpf8
Alias: AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 27394 bases
Position: chr11:82082619-82110012
Accession: 2179381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0030358	RRM_4	PF10598.9	2.2e-48	1	1
MGP_CBAJ_P0030356	RRM_4	PF10598.9	5.9e-48	1	1
MGP_CBAJ_P0030357	RRM_4	PF10598.9	5.9e-48	1	1
MGP_CBAJ_P0030356	U5_2-snRNA_bdg	PF10597.9	1.1e-73	1	1
MGP_CBAJ_P0030357	U5_2-snRNA_bdg	PF10597.9	1.1e-73	1	1
MGP_CBAJ_P0030356	PRO8NT	PF08082.11	2.4e-86	1	1
MGP_CBAJ_P0030357	PRO8NT	PF08082.11	2.4e-86	1	1
MGP_CBAJ_P0030358	PRO8NT	PF08082.11	3e-43	1	2
MGP_CBAJ_P0030358	PRO8NT	PF08082.11	3e-43	2	2
MGP_CBAJ_P0030356	U6-snRNA_bdg	PF10596.9	2.8e-89	1	1
MGP_CBAJ_P0030357	U6-snRNA_bdg	PF10596.9	2.8e-89	1	1
MGP_CBAJ_P0030358	PROCN	PF08083.11	5.1e-236	1	1
MGP_CBAJ_P0030356	PROCN	PF08083.11	3e-235	1	1
MGP_CBAJ_P0030357	PROCN	PF08083.11	3e-235	1	1
MGP_CBAJ_P0030356	PRP8_domainIV	PF12134.8	5.3e-130	1	1
MGP_CBAJ_P0030357	PRP8_domainIV	PF12134.8	5.3e-130	1	1
MGP_CBAJ_P0030356	PROCT	PF08084.11	2.4e-53	1	1
MGP_CBAJ_P0030357	PROCT	PF08084.11	2.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0030356	-	7442	-	MGP_CBAJ_P0030356	2335 (aa)	-	Q99PV0
MGP_CBAJ_T0030357	-	7249	-	MGP_CBAJ_P0030357	2335 (aa)	-	-
MGP_CBAJ_T0030358	-	3371	-	MGP_CBAJ_P0030358	1044 (aa)	-	-
MGP_CBAJ_T0030359	-	721	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018437's network