EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018588 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 23254 bases
Position: chr11:91697609-91720862
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0030958	ResIII	PF04851.15	9.8e-06	1	1
MGP_CBAJ_P0030958	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0030958	-	3194	-	MGP_CBAJ_P0030958	598 (aa)	-	Q8K301
MGP_CBAJ_T0030959	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0018588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018588	Ddx52	66	32.530	MGP_CBAJ_G0016656	D1Pas1	61	32.530
MGP_CBAJ_G0018588	Ddx52	60	41.071	MGP_CBAJ_G0019324	Ddx1	55	41.071
MGP_CBAJ_G0018588	Ddx52	62	30.079	MGP_CBAJ_G0019033	Ddx5	62	35.345
MGP_CBAJ_G0018588	Ddx52	59	46.250	MGP_CBAJ_G0019198	Eif4a3	78	46.250
MGP_CBAJ_G0018588	Ddx52	70	30.222	MGP_CBAJ_G0022007	Ddx23	54	30.243
MGP_CBAJ_G0018588	Ddx52	59	43.396	MGP_CBAJ_G0018272	Eif4a1	87	43.396
MGP_CBAJ_G0018588	Ddx52	66	34.069	MGP_CBAJ_G0020639	Ddx4	57	34.069
MGP_CBAJ_G0018588	Ddx52	62	30.750	MGP_CBAJ_G0029763	Ddx55	63	30.750
MGP_CBAJ_G0018588	Ddx52	68	30.733	MGP_CBAJ_G0020311	Ddx41	65	31.026
MGP_CBAJ_G0018588	Ddx52	58	30.900	MGP_CBAJ_G0029554	Ddx51	64	30.900
MGP_CBAJ_G0018588	Ddx52	61	30.597	MGP_CBAJ_G0017747	Ddx56	80	33.493
MGP_CBAJ_G0018588	Ddx52	58	33.428	MGP_CBAJ_G0031075	Ddx47	83	32.011
MGP_CBAJ_G0018588	Ddx52	73	32.648	MGP_CBAJ_G0016283	Ddx59	64	33.741
MGP_CBAJ_G0018588	Ddx52	70	32.045	MGP_CBAJ_G0035227	Ddx3x	61	32.530
MGP_CBAJ_G0018588	Ddx52	61	30.081	MGP_CBAJ_G0033366	Ddx49	76	30.081
MGP_CBAJ_G0018588	Ddx52	68	31.935	MGP_CBAJ_G0016154	Ddx18	55	32.990
MGP_CBAJ_G0018588	Ddx52	69	34.135	MGP_CBAJ_G0034722	Ddx43	63	34.135
MGP_CBAJ_G0018588	Ddx52	68	30.456	MGP_CBAJ_G0021780	Ddx17	62	30.843