EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018645 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:96386178-96392555
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0031217	RRM_1	PF00076.22	6.2e-34	1	2
MGP_CBAJ_P0031217	RRM_1	PF00076.22	6.2e-34	2	2
MGP_CBAJ_P0031216	RRM_1	PF00076.22	2.4e-33	1	2
MGP_CBAJ_P0031216	RRM_1	PF00076.22	2.4e-33	2	2
MGP_CBAJ_P0031219	RRM_1	PF00076.22	2.6e-33	1	2
MGP_CBAJ_P0031219	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0031221	-	401	-	MGP_CBAJ_P0031221	57 (aa)	-	-
MGP_CBAJ_T0031219	-	1209	-	MGP_CBAJ_P0031219	253 (aa)	-	-
MGP_CBAJ_T0031222	-	758	-	-	- (aa)	-	-
MGP_CBAJ_T0031216	-	5357	-	MGP_CBAJ_P0031216	248 (aa)	-	Q6PDM2
MGP_CBAJ_T0031217	-	2948	-	MGP_CBAJ_P0031217	201 (aa)	-	-
MGP_CBAJ_T0031218	-	647	-	-	- (aa)	-	-
MGP_CBAJ_T0031220	-	895	-	MGP_CBAJ_P0031220	105 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0018645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018645	Srsf1	79	79.762	MGP_CBAJ_G0029628	Srsf9	78	70.330
MGP_CBAJ_G0018645	Srsf1	80	46.988	MGP_CBAJ_G0019609	Srsf5	96	51.020
MGP_CBAJ_G0018645	Srsf1	82	42.857	MGP_CBAJ_G0026507	Srsf6	58	40.670