EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0018650 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 450568 bases
Position: chr11:96721778-97172345
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0031238	RRM_1	PF00076.22	6.3e-34	1	2
MGP_CBAJ_P0031238	RRM_1	PF00076.22	6.3e-34	2	2
MGP_CBAJ_P0031239	RRM_1	PF00076.22	6.5e-34	1	2
MGP_CBAJ_P0031239	RRM_1	PF00076.22	6.5e-34	2	2
MGP_CBAJ_P0031242	RRM_1	PF00076.22	3.9e-22	1	1
MGP_CBAJ_P0031243	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0031238	-	5916	XM_006534432	MGP_CBAJ_P0031238	328 (aa)	XP_006534495	Q920Q6
MGP_CBAJ_T0031239	-	1857	-	MGP_CBAJ_P0031239	346 (aa)	-	-
MGP_CBAJ_T0031244	-	626	-	-	- (aa)	-	-
MGP_CBAJ_T0031243	-	665	-	MGP_CBAJ_P0031243	157 (aa)	-	-
MGP_CBAJ_T0031242	-	405	-	MGP_CBAJ_P0031242	113 (aa)	-	-
MGP_CBAJ_T0031241	-	2538	-	-	- (aa)	-	-
MGP_CBAJ_T0031240	-	1749	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0018650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0018650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018650	Msi2	88	47.525	MGP_CBAJ_G0025569	Hnrnpa3	50	41.848
MGP_CBAJ_G0018650	Msi2	84	30.208	MGP_CBAJ_G0028241	Elavl4	78	30.088
MGP_CBAJ_G0018650	Msi2	100	54.867	MGP_CBAJ_G0029451	Hnrnpdl	78	41.634
MGP_CBAJ_G0018650	Msi2	99	42.400	MGP_CBAJ_G0017227	Dazap1	92	49.462
MGP_CBAJ_G0018650	Msi2	61	41.429	MGP_CBAJ_G0017221	Cirbp	88	43.243
MGP_CBAJ_G0018650	Msi2	100	90.323	MGP_CBAJ_G0029632	Msi1	99	75.665
MGP_CBAJ_G0018650	Msi2	80	34.074	MGP_CBAJ_G0026647	Rbm38	70	38.095
MGP_CBAJ_G0018650	Msi2	100	53.982	MGP_CBAJ_G0029449	Hnrnpd	100	72.000
MGP_CBAJ_G0018650	Msi2	50	33.333	MGP_CBAJ_G0015777	Boll	65	32.857
MGP_CBAJ_G0018650	Msi2	100	44.348	MGP_CBAJ_G0030402	Hnrnpa2b1	56	48.193
MGP_CBAJ_G0018650	Msi2	100	52.212	MGP_CBAJ_G0017995	Hnrnpab	70	48.039
MGP_CBAJ_G0018650	Msi2	61	42.857	MGP_CBAJ_G0035193	Rbm3	82	43.243
MGP_CBAJ_G0018650	Msi2	65	38.356	MGP_CBAJ_G0033470	-	68	45.205
MGP_CBAJ_G0018650	Msi2	70	31.250	MGP_CBAJ_G0028108	Elavl2	72	32.632
MGP_CBAJ_G0018650	Msi2	100	35.398	MGP_CBAJ_G0028793	Tardbp	79	31.818
MGP_CBAJ_G0018650	Msi2	61	42.857	MGP_CBAJ_G0035395	Rbmx	88	45.205
MGP_CBAJ_G0018650	Msi2	60	33.824	MGP_CBAJ_G0019703	Slirp	70	33.824
MGP_CBAJ_G0018650	Msi2	99	41.228	MGP_CBAJ_G0020336	Hnrnpa0	59	41.989