EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0018719 (Gene tree)
Gene ID: -
Gene Symbol: Igf2bp1
Alias: AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|Vickz1|ZBP-1|Zbp1|mir-3063
Full Name: insulin-like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 57643 bases
Position: chr11:105434089-105491731
Accession: 1890357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0031512	KH_1	PF00013.29	4.8e-56	1	4
MGP_CBAJ_P0031512	KH_1	PF00013.29	4.8e-56	2	4
MGP_CBAJ_P0031512	KH_1	PF00013.29	4.8e-56	3	4
MGP_CBAJ_P0031512	KH_1	PF00013.29	4.8e-56	4	4
MGP_CBAJ_P0031512	RRM_1	PF00076.22	2e-16	1	2
MGP_CBAJ_P0031512	RRM_1	PF00076.22	2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0031513	-	690	-	-	- (aa)	-	-
MGP_CBAJ_T0031512	-	8389	-	MGP_CBAJ_P0031512	577 (aa)	-	O88477
MGP_CBAJ_T0031516	-	1108	-	-	- (aa)	-	-
MGP_CBAJ_T0031515	-	586	-	-	- (aa)	-	-
MGP_CBAJ_T0031514	-	576	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0018719	Igf2bp1	100	72.727	MGP_CBAJ_G0030390	Igf2bp3	100	72.727
MGP_CBAJ_G0018719	Igf2bp1	59	30.597	MGP_CBAJ_G0034883	Pcbp4	84	32.039
MGP_CBAJ_G0018719	Igf2bp1	60	33.333	MGP_CBAJ_G0017123	Pcbp3	66	33.582
MGP_CBAJ_G0018719	Igf2bp1	100	64.677	MGP_CBAJ_G0022369	Igf2bp2	99	64.618