EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0019033 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 9029 bases
Position: chr11:118219231-118228259
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0032747	P68HR	PF08061.11	4.1e-29	1	2
MGP_CBAJ_P0032747	P68HR	PF08061.11	4.1e-29	2	2
MGP_CBAJ_P0032747	DEAD	PF00270.29	5.7e-45	1	1
MGP_CBAJ_P0032752	DEAD	PF00270.29	1.5e-15	1	1
MGP_CBAJ_P0032753	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0032750	-	708	-	-	- (aa)	-	-
MGP_CBAJ_T0032751	-	810	-	-	- (aa)	-	-
MGP_CBAJ_T0032752	-	861	-	MGP_CBAJ_P0032752	182 (aa)	-	-
MGP_CBAJ_T0032753	-	831	-	MGP_CBAJ_P0032753	167 (aa)	-	-
MGP_CBAJ_T0032749	-	496	-	-	- (aa)	-	-
MGP_CBAJ_T0032748	-	3429	-	MGP_CBAJ_P0032748	406 (aa)	-	-
MGP_CBAJ_T0032747	-	3637	XM_006532135	MGP_CBAJ_P0032747	605 (aa)	XP_006532198	B1ARB9

Gene Model

Click here to download MGP_CBAJ_G0019033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0019033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0019033	Ddx5	52	34.737	MGP_CBAJ_G0022380	Eif4a2	59	31.878
MGP_CBAJ_G0019033	Ddx5	51	55.172	MGP_CBAJ_G0019198	Eif4a3	66	55.172
MGP_CBAJ_G0019033	Ddx5	88	42.857	MGP_CBAJ_G0019018	Ddx42	51	37.425
MGP_CBAJ_G0019033	Ddx5	86	32.857	MGP_CBAJ_G0016283	Ddx59	60	32.718
MGP_CBAJ_G0019033	Ddx5	71	30.861	MGP_CBAJ_G0025245	Ddx31	51	31.880
MGP_CBAJ_G0019033	Ddx5	80	38.922	MGP_CBAJ_G0020639	Ddx4	51	39.394
MGP_CBAJ_G0019033	Ddx5	93	82.540	MGP_CBAJ_G0021780	Ddx17	87	66.898
MGP_CBAJ_G0019033	Ddx5	71	35.667	MGP_CBAJ_G0033366	Ddx49	87	37.188
MGP_CBAJ_G0019033	Ddx5	80	42.229	MGP_CBAJ_G0035227	Ddx3x	61	41.076
MGP_CBAJ_G0019033	Ddx5	71	37.457	MGP_CBAJ_G0031075	Ddx47	74	37.261
MGP_CBAJ_G0019033	Ddx5	89	44.504	MGP_CBAJ_G0034722	Ddx43	68	41.480
MGP_CBAJ_G0019033	Ddx5	78	37.500	MGP_CBAJ_G0018272	Eif4a1	78	45.161
MGP_CBAJ_G0019033	Ddx5	81	37.941	MGP_CBAJ_G0020311	Ddx41	64	36.700
MGP_CBAJ_G0019033	Ddx5	73	31.148	MGP_CBAJ_G0034191	Ddx25	62	33.758
MGP_CBAJ_G0019033	Ddx5	80	42.229	MGP_CBAJ_G0016656	D1Pas1	74	36.957
MGP_CBAJ_G0019033	Ddx5	62	35.345	MGP_CBAJ_G0018588	Ddx52	62	30.079
MGP_CBAJ_G0019033	Ddx5	52	30.094	MGP_CBAJ_G0033503	Ddx39	72	30.094