EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0019168 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Plus strand
Length
118522 bases
Position
chr11:130598780-130717301
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0033421Ago_hookPF10427.98.5e-2411
MGP_CBAJ_P0033423Ago_hookPF10427.98.5e-2411
MGP_CBAJ_P0033424Ago_hookPF10427.99.5e-2411
MGP_CBAJ_P0033424RRM_1PF00076.220.0004111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0033425-742--- (aa)--
MGP_CBAJ_T0033424-6609-MGP_CBAJ_P00334241732 (aa)--
MGP_CBAJ_T0033426-1829--- (aa)--
MGP_CBAJ_T0033421-8707XM_006533109MGP_CBAJ_P00334211900 (aa)XP_006533172B1ATC3
MGP_CBAJ_T0033423-8830-MGP_CBAJ_P00334231900 (aa)--
MGP_CBAJ_T0033422-11574--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0019168's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0019168's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0019168Tnrc6c9940.570MGP_CBAJ_G0032630Tnrc6a9844.685
MGP_CBAJ_G0019168Tnrc6c9936.215MGP_CBAJ_G0021806Tnrc6b9637.419

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us