EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0019190 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
454846 bases
Position
chr11:131491707-131946552
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0033519Fox-1_CPF12414.82.3e-4511
MGP_CBAJ_P0033522Fox-1_CPF12414.82.3e-4511
MGP_CBAJ_P0033523Fox-1_CPF12414.82.3e-4511
MGP_CBAJ_P0033521Fox-1_CPF12414.82.4e-4111
MGP_CBAJ_P0033520Fox-1_CPF12414.82.5e-4111
MGP_CBAJ_P0033518Fox-1_CPF12414.82.9e-4111
MGP_CBAJ_P0033524Fox-1_CPF12414.81.6e-2111
MGP_CBAJ_P0033525RRM_1PF00076.223.1e-1911
MGP_CBAJ_P0033519RRM_1PF00076.221.5e-1811
MGP_CBAJ_P0033522RRM_1PF00076.221.5e-1811
MGP_CBAJ_P0033523RRM_1PF00076.221.6e-1811
MGP_CBAJ_P0033518RRM_1PF00076.221.9e-1811
MGP_CBAJ_P0033520RRM_1PF00076.222.1e-1811
MGP_CBAJ_P0033524RRM_1PF00076.221.9e-1411
MGP_CBAJ_P0033521RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0033520-3140-MGP_CBAJ_P0033520374 (aa)--
MGP_CBAJ_T0033521-1553-MGP_CBAJ_P0033521329 (aa)--
MGP_CBAJ_T0033519-2809-MGP_CBAJ_P0033519313 (aa)--
MGP_CBAJ_T0033518-3084XM_006533722MGP_CBAJ_P0033518360 (aa)XP_006533785Q8BIF2
MGP_CBAJ_T0033522-1542-MGP_CBAJ_P0033522313 (aa)--
MGP_CBAJ_T0033523-2150-MGP_CBAJ_P0033523327 (aa)--
MGP_CBAJ_T0033524-710-MGP_CBAJ_P0033524145 (aa)--
MGP_CBAJ_T0033525-900-MGP_CBAJ_P0033525169 (aa)--
MGP_CBAJ_T0033526-301--- (aa)--
MGP_CBAJ_T0033527-369--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0019190's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0019190's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0019190Rbfox39961.932MGP_CBAJ_G0021727Rbfox29161.972
MGP_CBAJ_G0019190Rbfox37231.429MGP_CBAJ_G0015777Boll5043.939
MGP_CBAJ_G0019190Rbfox35331.868MGP_CBAJ_G0032753Tial18131.111
MGP_CBAJ_G0019190Rbfox310071.930MGP_CBAJ_G0022193Rbfox19165.123
MGP_CBAJ_G0019190Rbfox36739.130MGP_CBAJ_G0028401Pabpc47736.709

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