EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0019306 (Gene tree)
Gene ID: -
Gene Symbol: Pum2
Alias: 5730503J23Rik|Kiaa0235|Pumm2
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 85322 bases
Position: chr12:6449960-6535281
Accession: 1931751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	1	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	2	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	3	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	4	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	5	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	6	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	7	8
MGP_CBAJ_P0034043	PUF	PF00806.19	1.4e-73	8	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	1	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	2	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	3	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	4	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	5	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	6	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	7	8
MGP_CBAJ_P0034041	PUF	PF00806.19	1.5e-73	8	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	1	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	2	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	3	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	4	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	5	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	6	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	7	8
MGP_CBAJ_P0034049	PUF	PF00806.19	1.5e-73	8	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	1	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	2	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	3	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	4	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	5	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	6	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	7	8
MGP_CBAJ_P0034042	PUF	PF00806.19	3.1e-73	8	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	1	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	2	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	3	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	4	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	5	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	6	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	7	8
MGP_CBAJ_P0034044	PUF	PF00806.19	3.1e-73	8	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	1	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	2	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	3	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	4	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	5	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	6	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	7	8
MGP_CBAJ_P0034048	PUF	PF00806.19	1.4e-72	8	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	1	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	2	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	3	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	4	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	5	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	6	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	7	8
MGP_CBAJ_P0034050	PUF	PF00806.19	1.4e-72	8	8
MGP_CBAJ_P0034056	PUF	PF00806.19	4.1e-40	1	4
MGP_CBAJ_P0034056	PUF	PF00806.19	4.1e-40	2	4
MGP_CBAJ_P0034056	PUF	PF00806.19	4.1e-40	3	4
MGP_CBAJ_P0034056	PUF	PF00806.19	4.1e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0034051	-	902	-	MGP_CBAJ_P0034051	262 (aa)	-	-
MGP_CBAJ_T0034052	-	648	-	MGP_CBAJ_P0034052	185 (aa)	-	-
MGP_CBAJ_T0034050	-	6226	-	MGP_CBAJ_P0034050	1066 (aa)	-	-
MGP_CBAJ_T0034057	-	612	-	-	- (aa)	-	-
MGP_CBAJ_T0034056	-	665	-	MGP_CBAJ_P0034056	221 (aa)	-	-
MGP_CBAJ_T0034042	-	4984	-	MGP_CBAJ_P0034042	1064 (aa)	-	-
MGP_CBAJ_T0034043	-	3587	-	MGP_CBAJ_P0034043	980 (aa)	-	-
MGP_CBAJ_T0034053	-	472	-	MGP_CBAJ_P0034053	109 (aa)	-	-
MGP_CBAJ_T0034041	-	5874	XM_006515277	MGP_CBAJ_P0034041	985 (aa)	XP_006515340	Q80U58
MGP_CBAJ_T0034046	-	6218	-	MGP_CBAJ_P0034046	35 (aa)	-	-
MGP_CBAJ_T0034047	-	6414	-	MGP_CBAJ_P0034047	1008 (aa)	-	-
MGP_CBAJ_T0034044	-	6311	-	MGP_CBAJ_P0034044	1064 (aa)	-	-
MGP_CBAJ_T0034045	-	518	-	-	- (aa)	-	-
MGP_CBAJ_T0034055	-	706	-	MGP_CBAJ_P0034055	234 (aa)	-	-
MGP_CBAJ_T0034048	-	3560	-	MGP_CBAJ_P0034048	1066 (aa)	-	-
MGP_CBAJ_T0034049	-	3295	-	MGP_CBAJ_P0034049	985 (aa)	-	-
MGP_CBAJ_T0034054	-	994	-	MGP_CBAJ_P0034054	35 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0019306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0019306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0019306	Pum2	100	88.835	MGP_CBAJ_G0028515	Pum1	86	87.294