EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0019609 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 11082 bases
Position: chr12:86999786-87010867
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0034854	RRM_1	PF00076.22	1.7e-30	1	2
MGP_CBAJ_P0034854	RRM_1	PF00076.22	1.7e-30	2	2
MGP_CBAJ_P0034859	RRM_1	PF00076.22	1.7e-30	1	2
MGP_CBAJ_P0034859	RRM_1	PF00076.22	1.7e-30	2	2
MGP_CBAJ_P0034864	RRM_1	PF00076.22	1.7e-30	1	2
MGP_CBAJ_P0034864	RRM_1	PF00076.22	1.7e-30	2	2
MGP_CBAJ_P0034856	RRM_1	PF00076.22	1.7e-30	1	2
MGP_CBAJ_P0034856	RRM_1	PF00076.22	1.7e-30	2	2
MGP_CBAJ_P0034858	RRM_1	PF00076.22	1.7e-30	1	2
MGP_CBAJ_P0034858	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0034860	-	538	-	-	- (aa)	-	-
MGP_CBAJ_T0034861	-	886	-	-	- (aa)	-	-
MGP_CBAJ_T0034862	-	547	-	MGP_CBAJ_P0034862	46 (aa)	-	-
MGP_CBAJ_T0034863	-	490	-	-	- (aa)	-	-
MGP_CBAJ_T0034864	-	1568	-	MGP_CBAJ_P0034864	268 (aa)	-	-
MGP_CBAJ_T0034865	-	3483	-	-	- (aa)	-	-
MGP_CBAJ_T0034859	-	1491	-	MGP_CBAJ_P0034859	268 (aa)	-	-
MGP_CBAJ_T0034858	-	1498	-	MGP_CBAJ_P0034858	269 (aa)	-	-
MGP_CBAJ_T0034855	-	2940	-	-	- (aa)	-	-
MGP_CBAJ_T0034854	-	1527	XM_006515629	MGP_CBAJ_P0034854	268 (aa)	XP_006515692	O35326
MGP_CBAJ_T0034857	-	2720	-	-	- (aa)	-	-
MGP_CBAJ_T0034856	-	1510	-	MGP_CBAJ_P0034856	269 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0019609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0019609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0019609	Srsf5	89	63.415	MGP_CBAJ_G0026507	Srsf6	50	71.642
MGP_CBAJ_G0019609	Srsf5	89	48.780	MGP_CBAJ_G0029628	Srsf9	68	39.394
MGP_CBAJ_G0019609	Srsf5	96	51.020	MGP_CBAJ_G0018645	Srsf1	80	46.988