EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0020353 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc6
Alias: 6030448M23Rik|AA420405
Full Name: zinc finger%2C CCHC domain containing 6
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 55384 bases
Position: chr13:63603148-63658531
Accession: 2387179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0036971	zf-CCHC	PF00098.23	1.1e-13	1	3
MGP_CBAJ_P0036971	zf-CCHC	PF00098.23	1.1e-13	2	3
MGP_CBAJ_P0036971	zf-CCHC	PF00098.23	1.1e-13	3	3
MGP_CBAJ_P0036971	PAP_assoc	PF03828.19	1.5e-27	1	2
MGP_CBAJ_P0036971	PAP_assoc	PF03828.19	1.5e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0036971	-	5551	XM_006517207	MGP_CBAJ_P0036971	1474 (aa)	XP_006517270	E9PUA2
MGP_CBAJ_T0036972	-	4476	-	MGP_CBAJ_P0036972	1491 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0020353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0020353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0020353	Zcchc6	63	67.209	MGP_CBAJ_G0028220	Zcchc11	59	58.396