EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0020378 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 96737 bases
Position: chr13:68409574-68506310
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0037027	ResIII	PF04851.15	1.5e-11	1	1
MGP_CBAJ_P0037030	ResIII	PF04851.15	1.9e-11	1	1
MGP_CBAJ_P0037028	ResIII	PF04851.15	2e-11	1	1
MGP_CBAJ_P0037025	ResIII	PF04851.15	1e-10	1	1
MGP_CBAJ_P0037031	ResIII	PF04851.15	1.3e-10	1	1
MGP_CBAJ_P0037024	ResIII	PF04851.15	8.3e-10	1	1
MGP_CBAJ_P0037027	DEAD	PF00270.29	3.5e-07	1	1
MGP_CBAJ_P0037031	DEAD	PF00270.29	4.1e-07	1	1
MGP_CBAJ_P0037030	DEAD	PF00270.29	5.2e-07	1	1
MGP_CBAJ_P0037028	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0037034	-	2573	-	MGP_CBAJ_P0037034	592 (aa)	-	-
MGP_CBAJ_T0037025	-	3436	-	MGP_CBAJ_P0037025	842 (aa)	-	-
MGP_CBAJ_T0037024	-	1592	-	MGP_CBAJ_P0037024	467 (aa)	-	Q9JIM3
MGP_CBAJ_T0037027	-	1888	-	MGP_CBAJ_P0037027	582 (aa)	-	-
MGP_CBAJ_T0037026	-	1820	-	-	- (aa)	-	-
MGP_CBAJ_T0037032	-	759	-	MGP_CBAJ_P0037032	152 (aa)	-	-
MGP_CBAJ_T0037033	-	987	-	-	- (aa)	-	-
MGP_CBAJ_T0037030	-	2529	-	MGP_CBAJ_P0037030	684 (aa)	-	-
MGP_CBAJ_T0037031	-	1726	-	MGP_CBAJ_P0037031	574 (aa)	-	-
MGP_CBAJ_T0037029	-	1961	-	MGP_CBAJ_P0037029	191 (aa)	-	-
MGP_CBAJ_T0037028	-	2692	-	MGP_CBAJ_P0037028	699 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0020378	Ercc6l2	82	30.353	MGP_CBAJ_G0035331	Smarca1	71	30.490
MGP_CBAJ_G0020378	Ercc6l2	81	30.021	MGP_CBAJ_G0027320	Chd1l	50	32.657