EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0020428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 26215 bases
Position: chr13:72992766-73018980
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	1	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	2	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	3	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	4	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	5	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	6	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	7	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	8	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	9	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	10	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	11	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	12	13
MGP_CBAJ_P0037130	zf-C2H2	PF00096.26	2.5e-75	13	13
MGP_CBAJ_P0037130	Ribosomal_60s	PF00428.19	3.3e-19	1	1
MGP_CBAJ_P0037130	Ribosomal_L10	PF00466.20	9.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0037130	-	3101	-	MGP_CBAJ_P0037130	770 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0020428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0020428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0020428	-	55	52.955	MGP_CBAJ_G0022930	Zfp51	87	52.955
MGP_CBAJ_G0020428	-	59	50.114	MGP_CBAJ_G0031596	Zfp780b	79	50.641
MGP_CBAJ_G0020428	-	56	38.010	MGP_CBAJ_G0031523	Zfp574	93	39.461
MGP_CBAJ_G0020428	-	75	47.548	MGP_CBAJ_G0033432	Zfp882	85	52.482
MGP_CBAJ_G0020428	-	59	52.679	MGP_CBAJ_G0033431	Zfp709	87	52.679
MGP_CBAJ_G0020428	-	56	50.549	MGP_CBAJ_G0029174	Zbtb49	64	48.611
MGP_CBAJ_G0020428	-	55	52.308	MGP_CBAJ_G0034135	Zfp872	86	55.623
MGP_CBAJ_G0020428	-	57	55.172	MGP_CBAJ_G0030842	Zfp637	81	51.031
MGP_CBAJ_G0020428	-	63	54.867	MGP_CBAJ_G0022928	Zfp677	93	54.867
MGP_CBAJ_G0020428	-	58	59.012	MGP_CBAJ_G0031486	Zfp235	73	59.012
MGP_CBAJ_G0020428	-	57	37.410	MGP_CBAJ_G0033644	Zfp319	90	36.226
MGP_CBAJ_G0020428	-	61	52.432	MGP_CBAJ_G0018126	Zfp867	82	52.432
MGP_CBAJ_G0020428	-	69	35.608	MGP_CBAJ_G0022959	Zscan10	79	44.727
MGP_CBAJ_G0020428	-	55	63.380	MGP_CBAJ_G0031659	Zfp420	99	63.529
MGP_CBAJ_G0020428	-	59	46.179	MGP_CBAJ_G0032704	-	84	46.179
MGP_CBAJ_G0020428	-	55	58.065	MGP_CBAJ_G0032703	Zfp768	52	58.065
MGP_CBAJ_G0020428	-	57	54.711	MGP_CBAJ_G0031493	Zfp94	74	54.711
MGP_CBAJ_G0020428	-	57	59.149	MGP_CBAJ_G0031491	Zfp93	59	59.149
MGP_CBAJ_G0020428	-	56	49.738	MGP_CBAJ_G0031229	Zfp628	60	48.585
MGP_CBAJ_G0020428	-	59	56.250	MGP_CBAJ_G0017981	Zfp454	80	52.722
MGP_CBAJ_G0020428	-	59	40.462	MGP_CBAJ_G0016294	Zbtb41	50	40.462
MGP_CBAJ_G0020428	-	57	43.871	MGP_CBAJ_G0026625	Zfp64	69	37.598
MGP_CBAJ_G0020428	-	55	46.732	MGP_CBAJ_G0028710	Zbtb17	58	42.450
MGP_CBAJ_G0020428	-	60	52.574	MGP_CBAJ_G0026162	Zfp661	87	52.574
MGP_CBAJ_G0020428	-	56	49.580	MGP_CBAJ_G0029510	Gfi1	100	49.580
MGP_CBAJ_G0020428	-	66	42.241	MGP_CBAJ_G0031237	Zfp865	79	38.272
MGP_CBAJ_G0020428	-	66	33.918	MGP_CBAJ_G0031238	-	66	30.691
MGP_CBAJ_G0020428	-	57	52.968	MGP_CBAJ_G0031792	Zfp715	64	52.968
MGP_CBAJ_G0020428	-	59	57.965	MGP_CBAJ_G0020404	Rslcan18	71	57.965
MGP_CBAJ_G0020428	-	60	54.728	MGP_CBAJ_G0020405	Zfp759	94	54.728
MGP_CBAJ_G0020428	-	61	38.596	MGP_CBAJ_G0030499	Prdm5	79	47.778
MGP_CBAJ_G0020428	-	56	59.375	MGP_CBAJ_G0021719	Zfp251	69	59.375
MGP_CBAJ_G0020428	-	59	45.775	MGP_CBAJ_G0030369	Repin1	98	39.048
MGP_CBAJ_G0020428	-	56	56.156	MGP_CBAJ_G0031485	Zfp112	62	56.156
MGP_CBAJ_G0020428	-	60	54.444	MGP_CBAJ_G0026587	Zfp334	94	54.444
MGP_CBAJ_G0020428	-	66	53.271	MGP_CBAJ_G0022951	Zfp945	90	53.271
MGP_CBAJ_G0020428	-	55	57.071	MGP_CBAJ_G0033801	Zfp1	80	56.500
MGP_CBAJ_G0020428	-	56	49.793	MGP_CBAJ_G0031492	Zfp61	57	49.541
MGP_CBAJ_G0020428	-	56	55.844	MGP_CBAJ_G0031490	Zfp108	70	55.844
MGP_CBAJ_G0020428	-	78	43.750	MGP_CBAJ_G0024306	Zfp236	68	50.000
MGP_CBAJ_G0020428	-	56	43.854	MGP_CBAJ_G0018076	Zfp672	88	51.339