EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0020639 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 60499 bases
Position: chr13:123173257-123233755
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0037805	DEAD	PF00270.29	4.5e-49	1	1
MGP_CBAJ_P0037806	DEAD	PF00270.29	4.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0037806	-	2848	-	MGP_CBAJ_P0037806	728 (aa)	-	-
MGP_CBAJ_T0037805	-	2770	XM_006517524	MGP_CBAJ_P0037805	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_CBAJ_G0020639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0020639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0020639	Ddx4	55	43.333	MGP_CBAJ_G0019198	Eif4a3	83	43.333
MGP_CBAJ_G0020639	Ddx4	53	38.684	MGP_CBAJ_G0016283	Ddx59	59	38.684
MGP_CBAJ_G0020639	Ddx4	57	39.163	MGP_CBAJ_G0021780	Ddx17	61	39.163
MGP_CBAJ_G0020639	Ddx4	52	33.687	MGP_CBAJ_G0033366	Ddx49	95	33.616
MGP_CBAJ_G0020639	Ddx4	67	50.513	MGP_CBAJ_G0035227	Ddx3x	69	51.528
MGP_CBAJ_G0020639	Ddx4	56	34.271	MGP_CBAJ_G0031075	Ddx47	93	33.760
MGP_CBAJ_G0020639	Ddx4	51	39.394	MGP_CBAJ_G0019033	Ddx5	80	38.922
MGP_CBAJ_G0020639	Ddx4	56	40.000	MGP_CBAJ_G0034722	Ddx43	60	40.000
MGP_CBAJ_G0020639	Ddx4	57	38.519	MGP_CBAJ_G0020311	Ddx41	64	38.519
MGP_CBAJ_G0020639	Ddx4	54	30.326	MGP_CBAJ_G0034191	Ddx25	80	30.488
MGP_CBAJ_G0020639	Ddx4	62	52.596	MGP_CBAJ_G0016656	D1Pas1	71	49.578
MGP_CBAJ_G0020639	Ddx4	57	34.069	MGP_CBAJ_G0018588	Ddx52	66	34.069