EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0021727 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox2
Alias
2810460A15Rik|Fbm2|Fox2|Fxh|Hrnbp2|Rbm9
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 2
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
244708 bases
Position
chr15:82625619-82870326
Accession
1933973
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0041146Fox-1_CPF12414.81.4e-4111
MGP_CBAJ_P0041145Fox-1_CPF12414.82.3e-4111
MGP_CBAJ_P0041144Fox-1_CPF12414.81.1e-3711
MGP_CBAJ_P0041143Fox-1_CPF12414.82.8e-2011
MGP_CBAJ_P0041144RRM_1PF00076.225.9e-1911
MGP_CBAJ_P0041143RRM_1PF00076.227e-1811
MGP_CBAJ_P0041146RRM_1PF00076.229.3e-1811
MGP_CBAJ_P0041145RRM_1PF00076.221.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0041143-6982XM_006521568MGP_CBAJ_P0041143435 (aa)XP_006521631Q8BP71
MGP_CBAJ_T0041146-6563-MGP_CBAJ_P0041146377 (aa)--
MGP_CBAJ_T0041145-7021-MGP_CBAJ_P0041145445 (aa)--
MGP_CBAJ_T0041144-6566-MGP_CBAJ_P0041144378 (aa)--
Gene Model
Click here to download MGP_CBAJ_G0021727's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0021727's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0021727Rbfox210062.044MGP_CBAJ_G0022193Rbfox110062.287
MGP_CBAJ_G0021727Rbfox29161.972MGP_CBAJ_G0019190Rbfox39961.932

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us