EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0021792 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Plus strand
Length
33381 bases
Position
chr15:85948855-85982235
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0041366APOBEC_NPF08210.112.6e-7912
MGP_CBAJ_P0041366APOBEC_NPF08210.112.6e-7922
MGP_CBAJ_P0041363APOBEC_NPF08210.113.3e-7912
MGP_CBAJ_P0041363APOBEC_NPF08210.113.3e-7922
MGP_CBAJ_P0041367APOBEC_NPF08210.113.3e-7912
MGP_CBAJ_P0041367APOBEC_NPF08210.113.3e-7922
MGP_CBAJ_P0041369APOBEC_NPF08210.113.6e-7912
MGP_CBAJ_P0041369APOBEC_NPF08210.113.6e-7922
MGP_CBAJ_P0041361APOBEC_NPF08210.112.6e-2611
MGP_CBAJ_P0041360APOBEC_NPF08210.117.6e-2611
MGP_CBAJ_P0041370APOBEC_NPF08210.118.7e-2411
MGP_CBAJ_P0041366APOBEC_CPF05240.147.7e-5412
MGP_CBAJ_P0041366APOBEC_CPF05240.147.7e-5422
MGP_CBAJ_P0041363APOBEC_CPF05240.141.2e-5312
MGP_CBAJ_P0041363APOBEC_CPF05240.141.2e-5322
MGP_CBAJ_P0041367APOBEC_CPF05240.141.3e-5312
MGP_CBAJ_P0041367APOBEC_CPF05240.141.3e-5322
MGP_CBAJ_P0041369APOBEC_CPF05240.141.5e-5312
MGP_CBAJ_P0041369APOBEC_CPF05240.141.5e-5322
MGP_CBAJ_P0041360APOBEC_CPF05240.144.4e-2811
MGP_CBAJ_P0041361APOBEC_CPF05240.145.2e-2811
MGP_CBAJ_P0041370APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0041370-648-MGP_CBAJ_P004137085 (aa)--
MGP_CBAJ_T0041371-731--- (aa)--
MGP_CBAJ_T0041372-2082--- (aa)--
MGP_CBAJ_T0041373-720--- (aa)--
MGP_CBAJ_T0041369-1323-MGP_CBAJ_P0041369440 (aa)--
MGP_CBAJ_T0041368-2246-MGP_CBAJ_P0041368392 (aa)--
MGP_CBAJ_T0041367-2780-MGP_CBAJ_P0041367430 (aa)--
MGP_CBAJ_T0041366-1980-MGP_CBAJ_P0041366407 (aa)--
MGP_CBAJ_T0041365-1217-MGP_CBAJ_P004136546 (aa)--
MGP_CBAJ_T0041364-699-MGP_CBAJ_P004136479 (aa)--
MGP_CBAJ_T0041363-2460-MGP_CBAJ_P0041363429 (aa)--
MGP_CBAJ_T0041362-607--- (aa)--
MGP_CBAJ_T0041361-817-MGP_CBAJ_P0041361151 (aa)--
MGP_CBAJ_T0041360-750XM_006521551MGP_CBAJ_P0041360166 (aa)XP_006521614Q99J72
Gene Model
Click here to download MGP_CBAJ_G0021792's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0021792's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0021792Apobec39642.169MGP_CBAJ_G0030889Aicda9138.251
MGP_CBAJ_G0021792Apobec39833.721MGP_CBAJ_G0023574Apobec27833.333
MGP_CBAJ_G0021792Apobec38438.028MGP_CBAJ_G0030890Apobec17434.737

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