EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0022117 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 33902 bases
Position: chr15:112363797-112397698
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0042383	KH_1	PF00013.29	1.6e-49	1	3
MGP_CBAJ_P0042383	KH_1	PF00013.29	1.6e-49	2	3
MGP_CBAJ_P0042383	KH_1	PF00013.29	1.6e-49	3	3
MGP_CBAJ_P0042385	KH_1	PF00013.29	2e-49	1	3
MGP_CBAJ_P0042385	KH_1	PF00013.29	2e-49	2	3
MGP_CBAJ_P0042385	KH_1	PF00013.29	2e-49	3	3
MGP_CBAJ_P0042384	KH_1	PF00013.29	2.4e-49	1	3
MGP_CBAJ_P0042384	KH_1	PF00013.29	2.4e-49	2	3
MGP_CBAJ_P0042384	KH_1	PF00013.29	2.4e-49	3	3
MGP_CBAJ_P0042383	KH_2	PF07650.17	2e-14	1	1
MGP_CBAJ_P0042385	KH_2	PF07650.17	2.5e-14	1	1
MGP_CBAJ_P0042384	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0042383	-	2725	XM_006520582	MGP_CBAJ_P0042383	331 (aa)	XP_006520645	Q61990
MGP_CBAJ_T0042384	-	2818	-	MGP_CBAJ_P0042384	362 (aa)	-	-
MGP_CBAJ_T0042385	-	2779	-	MGP_CBAJ_P0042385	349 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0022117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0022117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0022117	Pcbp2	99	78.338	MGP_CBAJ_G0017123	Pcbp3	99	82.143
MGP_CBAJ_G0022117	Pcbp2	95	35.556	MGP_CBAJ_G0022369	Igf2bp2	62	35.556
MGP_CBAJ_G0022117	Pcbp2	68	41.096	MGP_CBAJ_G0031414	-	50	41.096
MGP_CBAJ_G0022117	Pcbp2	97	59.877	MGP_CBAJ_G0034883	Pcbp4	98	66.321
MGP_CBAJ_G0022117	Pcbp2	69	39.726	MGP_CBAJ_G0019432	Nova1	53	39.726
MGP_CBAJ_G0022117	Pcbp2	68	33.333	MGP_CBAJ_G0023648	Khsrp	51	33.333
MGP_CBAJ_G0022117	Pcbp2	84	44.444	MGP_CBAJ_G0020342	Hnrnpk	64	44.000
MGP_CBAJ_G0022117	Pcbp2	54	30.303	MGP_CBAJ_G0032121	-	81	30.303
MGP_CBAJ_G0022117	Pcbp2	100	81.744	MGP_CBAJ_G0030641	Pcbp1	100	81.744