EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0022528 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb20
Alias: 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288
Full Name: zinc finger and BTB domain containing 20
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 805207 bases
Position: chr16:44337826-45143032
Accession: 1929213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0044069	zf-C2H2	PF00096.26	4.4e-22	1	5
MGP_CBAJ_P0044069	zf-C2H2	PF00096.26	4.4e-22	2	5
MGP_CBAJ_P0044069	zf-C2H2	PF00096.26	4.4e-22	3	5
MGP_CBAJ_P0044069	zf-C2H2	PF00096.26	4.4e-22	4	5
MGP_CBAJ_P0044069	zf-C2H2	PF00096.26	4.4e-22	5	5
MGP_CBAJ_P0044069	zf-met	PF12874.7	6.4e-07	1	2
MGP_CBAJ_P0044069	zf-met	PF12874.7	6.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0044056	-	754	-	MGP_CBAJ_P0044056	63 (aa)	-	-
MGP_CBAJ_T0044057	-	593	-	-	- (aa)	-	-
MGP_CBAJ_T0044054	-	425	-	-	- (aa)	-	-
MGP_CBAJ_T0044055	-	418	-	-	- (aa)	-	-
MGP_CBAJ_T0044053	-	521	-	-	- (aa)	-	-
MGP_CBAJ_T0044063	-	590	-	MGP_CBAJ_P0044063	60 (aa)	-	-
MGP_CBAJ_T0044062	-	787	-	MGP_CBAJ_P0044062	131 (aa)	-	-
MGP_CBAJ_T0044061	-	2049	-	-	- (aa)	-	-
MGP_CBAJ_T0044060	-	414	-	-	- (aa)	-	-
MGP_CBAJ_T0044067	-	736	-	-	- (aa)	-	-
MGP_CBAJ_T0044066	-	837	-	MGP_CBAJ_P0044066	138 (aa)	-	-
MGP_CBAJ_T0044058	-	821	-	MGP_CBAJ_P0044058	75 (aa)	-	-
MGP_CBAJ_T0044059	-	645	-	-	- (aa)	-	-
MGP_CBAJ_T0044069	-	2226	-	MGP_CBAJ_P0044069	741 (aa)	-	-
MGP_CBAJ_T0044068	-	267	-	-	- (aa)	-	-
MGP_CBAJ_T0044065	-	439	-	MGP_CBAJ_P0044065	3 (aa)	-	-
MGP_CBAJ_T0044064	-	463	-	MGP_CBAJ_P0044064	3 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0022528	Zbtb20	61	38.739	MGP_CBAJ_G0018311	Bcl6b	82	38.739